Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MIR5092-201ENST00000583139 88 ntBASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 AC108706.1-201ENST00000611053 297 ntBASIC2.46□□□□□ -2.02
CCDC163A0A0D9SF12 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 RNU6-728P-201ENST00000365375 104 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 MIR181B1-201ENST00000385240 110 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 AL158823.1-201ENST00000418441 478 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 RNA5SP233-201ENST00000459153 113 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 SNORA31.10-201ENST00000516482 106 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 RNA5SP437-201ENST00000517249 129 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 AC104465.1-201ENST00000611365 139 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 AL391903.3-201ENST00000612158 163 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 uc_338.4-201ENST00000616635 176 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 MIR1291-201ENST00000627649 87 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.45□□□□□ -2.02
CCDC163A0A0D9SF12 SNORA63D-201ENST00000364359 132 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 Y_RNA.357-201ENST00000365487 109 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 Y_RNA.435-201ENST00000384095 112 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 RNU6-950P-201ENST00000384651 107 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 Y_RNA.555-201ENST00000384673 110 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 MIR802-201ENST00000390235 94 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 MIR1289-2-201ENST00000408360 111 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 RNA5SP100-201ENST00000410903 110 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 RNA5SP59-201ENST00000410922 110 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 AL603825.1-201ENST00000438481 80 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 AC109810.1-201ENST00000534066 224 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 MRPS18CP4-201ENST00000535821 231 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 SNORA28-201ENST00000606769 126 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.44□□□□□ -2.02
CCDC163A0A0D9SF12 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 Y_RNA.8-201ENST00000362353 102 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 RNU6-296P-201ENST00000384608 107 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 RNA5SP482-201ENST00000391269 118 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 RN7SKP101-201ENST00000411376 320 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 AL356379.1-201ENST00000414105 126 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 SEPT7P4-201ENST00000437076 306 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 SNORD11-201ENST00000459124 84 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 MIR514B-201ENST00000516774 80 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 SNORA31.17-201ENST00000516953 127 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 Pinc.1-201ENST00000616452 154 ntBASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC163A0A0D9SF12 Y_RNA.75-201ENST00000362927 97 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 Y_RNA.240-201ENST00000364469 95 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 RNU6-275P-201ENST00000364910 107 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 MIR15B-201ENST00000385045 98 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 MIR764-201ENST00000390811 85 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 AL034345.1-201ENST00000407768 123 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 RNA5SP281-201ENST00000516504 135 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 RNU7-149P-201ENST00000516739 59 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 RNU7-28P-201ENST00000516759 62 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 MIR4709-201ENST00000577272 72 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 AL627230.6-201ENST00000611129 280 ntBASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC163A0A0D9SF12 RNU6-312P-201ENST00000364629 107 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 SNORA79-201ENST00000408376 140 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 AC006461.1-201ENST00000412637 326 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 SNRPGP8-201ENST00000454064 226 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 snoU13.27-201ENST00000459278 104 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 RNU6-1299P-201ENST00000516316 100 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 RNA5SP481-201ENST00000516814 122 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 MIR4299-201ENST00000577899 72 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 AL773524.1-201ENST00000614065 229 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 Z82195.2-201ENST00000612348 18351 ntBASIC2.41□□□□□ -2.02
CCDC163A0A0D9SF12 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 RNY3P5-201ENST00000384127 102 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 RNU6-163P-201ENST00000384396 106 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 MIR522-201ENST00000385071 87 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 RNA5SP212-201ENST00000391223 107 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 MIR548I3-201ENST00000408378 149 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 MIR548I1-201ENST00000408810 149 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 NDUFA4P2-201ENST00000489989 244 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 OR9P1P-201ENST00000496431 281 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 RNU6-1116P-201ENST00000517269 99 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 AL021707.8-201ENST00000609428 183 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 AC046143.2-201ENST00000609789 160 ntBASIC2.4□□□□□ -2.03
CCDC163A0A0D9SF12 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 SNORD45.3-201ENST00000363836 72 ntBASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 MIR676-201ENST00000390702 67 ntBASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 PCNPP3-201ENST00000393579 471 ntBASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 RNU2-70P-201ENST00000410718 179 ntBASIC2.39□□□□□ -2.03
CCDC163A0A0D9SF12 HMGN2P19-201ENST00000425149 265 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 315.1 ms