Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 AC063944.3-201ENST00000609969 533 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 MIR6082-201ENST00000613604 109 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 AC072046.2-201ENST00000618366 268 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 AL607023.1-201ENST00000620045 248 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 AC084368.1-201ENST00000620935 65 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 Z97988.1-201ENST00000637697 135 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 MIR410-201ENST00000362222 80 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-268P-201ENST00000364174 107 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-541P-201ENST00000384709 110 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-291P-201ENST00000384720 107 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU2-29P-201ENST00000410423 189 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 UQCRBP2-201ENST00000447827 297 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 RPL7P42-201ENST00000481005 679 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 RNA5SP66-201ENST00000517178 101 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 AC090616.2-202ENST00000584248 222 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 AC027807.2-201ENST00000616099 408 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 MIR7111-201ENST00000619751 72 ntBASIC-0.97□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-501P-201ENST00000364072 100 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 RPL30P16-201ENST00000419341 429 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 AL031667.1-201ENST00000440222 725 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 MTATP6P14-201ENST00000455189 673 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 U8.19-201ENST00000459095 133 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 U8.22-201ENST00000459141 133 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 MIR5583-1-201ENST00000580941 59 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 AP000811.1-201ENST00000603803 651 ntBASIC-0.98□□□□□ -2.57
TRAV1-2A0A0B4J238 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-454P-201ENST00000364292 107 ntBASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 U8.6-201ENST00000364939 135 ntBASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 RNA5SP25-201ENST00000410815 110 ntBASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 MTATP6P23-201ENST00000440153 476 ntBASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 RPL30P10-201ENST00000488148 337 ntBASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 AC006566.1-201ENST00000608943 513 ntBASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 AP002371.2-201ENST00000624450 503 ntBASIC-0.99□□□□□ -2.57
TRAV1-2A0A0B4J238 SNORD114-15-201ENST00000364687 72 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU5E-5P-201ENST00000365379 116 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-442P-201ENST00000383968 104 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-1144P-201ENST00000384247 104 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-903P-201ENST00000391270 109 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 ERLEC1P1-201ENST00000433806 578 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 USP9YP12-201ENST00000450481 570 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 SCARNA17-201ENST00000516183 144 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-1265P-201ENST00000516342 103 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 RNA5SP169-201ENST00000517268 117 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 MTND1P24-201ENST00000552175 861 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 AC018714.1-201ENST00000605028 208 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 AC005609.4-201ENST00000625071 447 ntBASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1□□□□□ -2.57
TRAV1-2A0A0B4J238 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-281P-201ENST00000384212 103 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-35P-201ENST00000384530 107 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-535P-201ENST00000384722 107 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-602P-201ENST00000411155 105 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU2-11P-201ENST00000459191 187 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 MTCO1P29-201ENST00000496868 288 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 AC087588.2-201ENST00000617667 426 ntBASIC-1.01□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU4-68P-201ENST00000364314 141 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 SNORD12C-201ENST00000386307 89 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-913P-201ENST00000390913 95 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 AC108059.2-201ENST00000434626 151 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 MTCO3P38-201ENST00000468910 766 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 AC131281.1-201ENST00000522984 164 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 AL596211.1-201ENST00000569873 2277 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 Z84480.1-201ENST00000605131 311 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 AL133255.1-201ENST00000606374 441 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 HULC.1-201ENST00000612720 240 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 AC099654.12-201ENST00000639868 649 ntBASIC-1.02□□□□□ -2.57
TRAV1-2A0A0B4J238 SNORD83B-201ENST00000386745 93 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 MTATP6P18-201ENST00000417994 673 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 RNU7-180P-201ENST00000459240 63 ntBASIC-1.03□□□□□ -2.57
TRAV1-2A0A0B4J238 CCDC34P1-201ENST00000507441 517 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms