Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 AL023284.2-201ENST00000405850 579 ntBASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 VENTXP5-201ENST00000523979 775 ntBASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTDP1Q9Y5B0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 STARP1-201ENST00000397973 869 ntBASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 AC034232.1-201ENST00000506026 1064 ntBASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 AC093458.2-201ENST00000623150 629 ntBASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTDP1Q9Y5B0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 AC036111.1-201ENST00000533973 1582 ntBASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 LINC01311-201ENST00000565162 1445 ntBASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTDP1Q9Y5B0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 MIR3180-5-201ENST00000583743 153 ntBASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTDP1Q9Y5B0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms