Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.03■□□□□ 0.8
TLR9Q9NR96 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.03■□□□□ 0.8
TLR9Q9NR96 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR9Q9NR96 AC112907.3-201ENST00000577781 2400 ntBASIC20.03■□□□□ 0.8
TLR9Q9NR96 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TLR9Q9NR96 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR9Q9NR96 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.02■□□□□ 0.8
TLR9Q9NR96 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.02■□□□□ 0.8
TLR9Q9NR96 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR9Q9NR96 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR9Q9NR96 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.02■□□□□ 0.8
TLR9Q9NR96 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.02■□□□□ 0.8
TLR9Q9NR96 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.02■□□□□ 0.8
TLR9Q9NR96 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.02■□□□□ 0.8
TLR9Q9NR96 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.02■□□□□ 0.8
TLR9Q9NR96 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR9Q9NR96 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.02■□□□□ 0.8
TLR9Q9NR96 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR9Q9NR96 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TLR9Q9NR96 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TLR9Q9NR96 GABARAPL3-202ENST00000624044 1851 ntBASIC20.02■□□□□ 0.8
TLR9Q9NR96 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TLR9Q9NR96 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.02■□□□□ 0.79
TLR9Q9NR96 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.02■□□□□ 0.79
TLR9Q9NR96 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TLR9Q9NR96 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TLR9Q9NR96 KRT8P3-201ENST00000519669 1449 ntBASIC20.02■□□□□ 0.79
TLR9Q9NR96 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.01■□□□□ 0.79
TLR9Q9NR96 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TLR9Q9NR96 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TLR9Q9NR96 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.01■□□□□ 0.79
TLR9Q9NR96 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TLR9Q9NR96 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TLR9Q9NR96 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TLR9Q9NR96 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TLR9Q9NR96 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 TSPY19P-201ENST00000418461 509 ntBASIC20■□□□□ 0.79
TLR9Q9NR96 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 DRAXINP1-201ENST00000437611 948 ntBASIC20■□□□□ 0.79
TLR9Q9NR96 TSPY18P-201ENST00000441642 509 ntBASIC20■□□□□ 0.79
TLR9Q9NR96 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20■□□□□ 0.79
TLR9Q9NR96 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20■□□□□ 0.79
TLR9Q9NR96 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 AL732292.2-201ENST00000609649 430 ntBASIC20■□□□□ 0.79
TLR9Q9NR96 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TLR9Q9NR96 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20■□□□□ 0.79
TLR9Q9NR96 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TLR9Q9NR96 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TLR9Q9NR96 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TLR9Q9NR96 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TLR9Q9NR96 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TLR9Q9NR96 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TLR9Q9NR96 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 LINC00265-3P-201ENST00000447588 903 ntBASIC19.99■□□□□ 0.79
TLR9Q9NR96 EMBP1-201ENST00000458200 901 ntBASIC19.99■□□□□ 0.79
TLR9Q9NR96 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.99■□□□□ 0.79
TLR9Q9NR96 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 AP000867.3-201ENST00000524675 377 ntBASIC19.99■□□□□ 0.79
TLR9Q9NR96 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.99■□□□□ 0.79
TLR9Q9NR96 TPSP2-201ENST00000561760 610 ntBASIC19.99■□□□□ 0.79
TLR9Q9NR96 AL121772.3-201ENST00000610840 674 ntBASIC19.99■□□□□ 0.79
TLR9Q9NR96 AC099778.1-201ENST00000568593 1911 ntBASIC19.99■□□□□ 0.79
TLR9Q9NR96 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.99■□□□□ 0.79
TLR9Q9NR96 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 PCDHAC2-203ENST00000615316 3011 ntBASIC19.99■□□□□ 0.79
TLR9Q9NR96 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TLR9Q9NR96 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
TLR9Q9NR96 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TLR9Q9NR96 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms