Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 RN7SL606P-201ENST00000472779 293 ntBASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.81■■□□□ 1.4
CNTNAP4Q9C0A0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 AC079776.4-201ENST00000511039 504 ntBASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.8■■□□□ 1.4
CNTNAP4Q9C0A0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 AC092667.1-201ENST00000434301 2586 ntBASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 BX640515.1-201ENST00000617215 977 ntBASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 REXO1L6P-202ENST00000619970 1078 ntBASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CNTNAP4Q9C0A0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 SAPCD2P3-201ENST00000455031 850 ntBASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNTNAP4Q9C0A0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 Z82202.1-201ENST00000623446 1880 ntBASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 AP005901.3-202ENST00000581653 237 ntBASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 AC120114.3-201ENST00000611923 658 ntBASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNTNAP4Q9C0A0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.77■■□□□ 1.39
CNTNAP4Q9C0A0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 KRT8P32-201ENST00000512863 1461 ntBASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CNTNAP4Q9C0A0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms