Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA3Q99758 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC25.17■■□□□ 1.62
ABCA3Q99758 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC25.17■■□□□ 1.62
ABCA3Q99758 AL049840.3-201ENST00000602669 611 ntBASIC25.17■■□□□ 1.62
ABCA3Q99758 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC25.17■■□□□ 1.62
ABCA3Q99758 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA3Q99758 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA3Q99758 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC25.17■■□□□ 1.62
ABCA3Q99758 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
ABCA3Q99758 FAM220CP-201ENST00000395253 831 ntBASIC25.17■■□□□ 1.62
ABCA3Q99758 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC25.17■■□□□ 1.62
ABCA3Q99758 RN7SL606P-201ENST00000472779 293 ntBASIC25.17■■□□□ 1.62
ABCA3Q99758 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC25.17■■□□□ 1.62
ABCA3Q99758 MOK-208ENST00000519058 917 ntTSL 2 BASIC25.17■■□□□ 1.62
ABCA3Q99758 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC25.17■■□□□ 1.62
ABCA3Q99758 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC25.17■■□□□ 1.62
ABCA3Q99758 AC145285.3-201ENST00000564603 959 ntBASIC25.17■■□□□ 1.62
ABCA3Q99758 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC25.17■■□□□ 1.62
ABCA3Q99758 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA3Q99758 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
ABCA3Q99758 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC25.17■■□□□ 1.62
ABCA3Q99758 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA3Q99758 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ABCA3Q99758 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC25.17■■□□□ 1.62
ABCA3Q99758 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC25.17■■□□□ 1.62
ABCA3Q99758 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ABCA3Q99758 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.16■■□□□ 1.62
ABCA3Q99758 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
ABCA3Q99758 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC25.16■■□□□ 1.62
ABCA3Q99758 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC25.16■■□□□ 1.62
ABCA3Q99758 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC25.16■■□□□ 1.62
ABCA3Q99758 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC25.16■■□□□ 1.62
ABCA3Q99758 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ABCA3Q99758 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.16■■□□□ 1.62
ABCA3Q99758 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ABCA3Q99758 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.15■■□□□ 1.62
ABCA3Q99758 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC25.15■■□□□ 1.62
ABCA3Q99758 KRT89P-201ENST00000620027 1478 ntBASIC25.15■■□□□ 1.62
ABCA3Q99758 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC25.15■■□□□ 1.62
ABCA3Q99758 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC25.15■■□□□ 1.62
ABCA3Q99758 LITAF-211ENST00000572255 516 ntTSL 4 BASIC25.15■■□□□ 1.62
ABCA3Q99758 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
ABCA3Q99758 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 AC008556.1-201ENST00000610908 2040 ntBASIC25.15■■□□□ 1.62
ABCA3Q99758 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC25.15■■□□□ 1.62
ABCA3Q99758 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC25.15■■□□□ 1.62
ABCA3Q99758 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC25.15■■□□□ 1.62
ABCA3Q99758 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC25.15■■□□□ 1.62
ABCA3Q99758 AC096582.2-201ENST00000510860 516 ntBASIC25.15■■□□□ 1.62
ABCA3Q99758 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC25.15■■□□□ 1.62
ABCA3Q99758 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC25.15■■□□□ 1.62
ABCA3Q99758 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
ABCA3Q99758 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ABCA3Q99758 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ABCA3Q99758 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC25.14■■□□□ 1.62
ABCA3Q99758 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ABCA3Q99758 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
ABCA3Q99758 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ABCA3Q99758 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.14■■□□□ 1.62
ABCA3Q99758 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ABCA3Q99758 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
ABCA3Q99758 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ABCA3Q99758 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ABCA3Q99758 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ABCA3Q99758 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC25.14■■□□□ 1.61
ABCA3Q99758 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ABCA3Q99758 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC25.14■■□□□ 1.61
ABCA3Q99758 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ABCA3Q99758 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ABCA3Q99758 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC25.14■■□□□ 1.61
ABCA3Q99758 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
ABCA3Q99758 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ABCA3Q99758 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
ABCA3Q99758 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
ABCA3Q99758 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ABCA3Q99758 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.13■■□□□ 1.61
ABCA3Q99758 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ABCA3Q99758 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ABCA3Q99758 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC25.13■■□□□ 1.61
ABCA3Q99758 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
ABCA3Q99758 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ABCA3Q99758 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC25.13■■□□□ 1.61
ABCA3Q99758 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ABCA3Q99758 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ABCA3Q99758 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
ABCA3Q99758 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC25.13■■□□□ 1.61
ABCA3Q99758 AC139887.3-201ENST00000568585 713 ntBASIC25.13■■□□□ 1.61
ABCA3Q99758 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC25.13■■□□□ 1.61
ABCA3Q99758 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
ABCA3Q99758 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms