Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 IGHGP-201ENST00000390555 1178 ntBASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 AF186996.4-201ENST00000467186 377 ntBASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 MIR5100-201ENST00000579544 119 ntBASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.74□□□□□ -0.37
ALMS1Q8TCU4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 AC134684.3-201ENST00000641758 218 ntBASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 AL355877.3-201ENST00000622820 899 ntBASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
ALMS1Q8TCU4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 VENTXP7-201ENST00000475503 772 ntBASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 IGHV3-22-201ENST00000520721 359 ntBASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 SART3-203ENST00000546611 1184 ntBASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 MINOS1P3-201ENST00000457048 203 ntBASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.72□□□□□ -0.37
ALMS1Q8TCU4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 BID-212ENST00000614949 1988 ntTSL 5 BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 GPR32P1-201ENST00000601788 811 ntBASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ALMS1Q8TCU4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms