Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 KRT8P26-201ENST00000534154 1276 ntBASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 AC024243.1-201ENST00000609234 778 ntBASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.19■□□□□ 0.66
SYNPOQ8N3V7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 GPAT2P1-201ENST00000444924 1672 ntBASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 ZNF815P-204ENST00000434898 1737 ntBASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 FDX1P1-201ENST00000449115 551 ntBASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 KRT17P6-201ENST00000453795 1220 ntBASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 AC007952.6-201ENST00000573168 2673 ntBASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 AC003957.1-201ENST00000625108 2673 ntBASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SYNPOQ8N3V7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 MIR3180-5-201ENST00000583743 153 ntBASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 AC093525.10-201ENST00000625130 1569 ntBASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.17■□□□□ 0.66
SYNPOQ8N3V7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 AL023284.2-201ENST00000405850 579 ntBASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms