Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 AL023284.2-201ENST00000405850 579 ntBASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 AC092647.4-201ENST00000457211 535 ntBASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 AC063952.2-201ENST00000498792 1227 ntBASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 CR769767.2-201ENST00000622735 460 ntBASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 KRT8P3-201ENST00000519669 1449 ntBASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCN4BQ8IWT1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 AC141586.3-201ENST00000562166 1838 ntBASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 AC120498.9-201ENST00000339021 3867 ntBASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 LINC01238-205ENST00000567549 1107 ntBASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 AL031432.5-201ENST00000641059 760 ntBASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.92■□□□□ 0.78
SCN4BQ8IWT1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 AL441883.1-201ENST00000566170 1045 ntBASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.91■□□□□ 0.78
SCN4BQ8IWT1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 MCCD1P1-208ENST00000445732 328 ntBASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCN4BQ8IWT1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms