Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-BQ31612 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
HLA-BQ31612 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-BQ31612 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-BQ31612 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HLA-BQ31612 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-BQ31612 KRT18P31-201ENST00000506277 1292 ntBASIC18.33■□□□□ 0.52
HLA-BQ31612 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.33■□□□□ 0.52
HLA-BQ31612 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-BQ31612 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.33■□□□□ 0.52
HLA-BQ31612 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-BQ31612 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-BQ31612 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.33■□□□□ 0.52
HLA-BQ31612 AL109659.2-201ENST00000606809 1674 ntBASIC18.33■□□□□ 0.52
HLA-BQ31612 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-BQ31612 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-BQ31612 CLDN5-201ENST00000403084 2357 ntBASIC18.33■□□□□ 0.52
HLA-BQ31612 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-BQ31612 KRT8P7-201ENST00000533003 1432 ntBASIC18.32■□□□□ 0.52
HLA-BQ31612 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-BQ31612 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-BQ31612 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-BQ31612 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
HLA-BQ31612 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 AC079781.3-201ENST00000449110 356 ntBASIC18.32■□□□□ 0.52
HLA-BQ31612 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 AC104390.1-201ENST00000555663 520 ntBASIC18.32■□□□□ 0.52
HLA-BQ31612 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-BQ31612 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.32■□□□□ 0.52
HLA-BQ31612 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
HLA-BQ31612 AC010240.3-201ENST00000607688 395 ntBASIC18.32■□□□□ 0.52
HLA-BQ31612 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 RCC2P3-201ENST00000418112 1537 ntBASIC18.32■□□□□ 0.52
HLA-BQ31612 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-BQ31612 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-BQ31612 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 AC008556.1-201ENST00000610908 2040 ntBASIC18.32■□□□□ 0.52
HLA-BQ31612 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-BQ31612 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HLA-BQ31612 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-BQ31612 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-BQ31612 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-BQ31612 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.31■□□□□ 0.52
HLA-BQ31612 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 AC104819.1-201ENST00000504587 486 ntBASIC18.31■□□□□ 0.52
HLA-BQ31612 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 AC090616.6-201ENST00000582640 721 ntBASIC18.31■□□□□ 0.52
HLA-BQ31612 AC005332.3-201ENST00000589904 676 ntBASIC18.31■□□□□ 0.52
HLA-BQ31612 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-BQ31612 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HLA-BQ31612 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-BQ31612 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HLA-BQ31612 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HLA-BQ31612 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-BQ31612 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HLA-BQ31612 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-BQ31612 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
HLA-BQ31612 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-BQ31612 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-BQ31612 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HLA-BQ31612 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-BQ31612 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-BQ31612 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.3■□□□□ 0.52
HLA-BQ31612 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-BQ31612 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-BQ31612 AP003733.1-201ENST00000491725 852 ntBASIC18.3■□□□□ 0.52
HLA-BQ31612 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.3■□□□□ 0.52
HLA-BQ31612 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-BQ31612 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.3■□□□□ 0.52
HLA-BQ31612 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HLA-BQ31612 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms