Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
ATN1P54259 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.81■□□□□ 0.92
ATN1P54259 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.81■□□□□ 0.92
ATN1P54259 AC092865.5-201ENST00000545435 363 ntBASIC20.81■□□□□ 0.92
ATN1P54259 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC20.81■□□□□ 0.92
ATN1P54259 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATN1P54259 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.81■□□□□ 0.92
ATN1P54259 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.81■□□□□ 0.92
ATN1P54259 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATN1P54259 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATN1P54259 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATN1P54259 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.8■□□□□ 0.92
ATN1P54259 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.8■□□□□ 0.92
ATN1P54259 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.8■□□□□ 0.92
ATN1P54259 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.8■□□□□ 0.92
ATN1P54259 SAPCD2P3-201ENST00000455031 850 ntBASIC20.8■□□□□ 0.92
ATN1P54259 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 AF238378.1-201ENST00000526806 358 ntBASIC20.8■□□□□ 0.92
ATN1P54259 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATN1P54259 AP001005.1-201ENST00000571755 1248 ntBASIC20.8■□□□□ 0.92
ATN1P54259 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.8■□□□□ 0.92
ATN1P54259 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.8■□□□□ 0.92
ATN1P54259 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.8■□□□□ 0.92
ATN1P54259 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.8■□□□□ 0.92
ATN1P54259 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.8■□□□□ 0.92
ATN1P54259 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATN1P54259 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATN1P54259 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
ATN1P54259 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ATN1P54259 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATN1P54259 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ATN1P54259 AL512408.1-201ENST00000569378 2000 ntBASIC20.79■□□□□ 0.92
ATN1P54259 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATN1P54259 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.79■□□□□ 0.92
ATN1P54259 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATN1P54259 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.79■□□□□ 0.92
ATN1P54259 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.79■□□□□ 0.92
ATN1P54259 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.79■□□□□ 0.92
ATN1P54259 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.79■□□□□ 0.92
ATN1P54259 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ATN1P54259 AL390719.2-201ENST00000606993 987 ntBASIC20.79■□□□□ 0.92
ATN1P54259 TP73-AS1-207ENST00000624167 988 ntBASIC20.79■□□□□ 0.92
ATN1P54259 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.79■□□□□ 0.92
ATN1P54259 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATN1P54259 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATN1P54259 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ATN1P54259 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.79■□□□□ 0.92
ATN1P54259 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATN1P54259 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
ATN1P54259 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATN1P54259 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.78■□□□□ 0.92
ATN1P54259 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.78■□□□□ 0.92
ATN1P54259 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 NUS1P2-201ENST00000417358 873 ntBASIC20.78■□□□□ 0.92
ATN1P54259 IGHV3-47-201ENST00000425060 335 ntBASIC20.78■□□□□ 0.92
ATN1P54259 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.78■□□□□ 0.92
ATN1P54259 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.78■□□□□ 0.92
ATN1P54259 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.78■□□□□ 0.92
ATN1P54259 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.78■□□□□ 0.92
ATN1P54259 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.78■□□□□ 0.92
ATN1P54259 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.78■□□□□ 0.92
ATN1P54259 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.78■□□□□ 0.92
ATN1P54259 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ATN1P54259 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATN1P54259 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.77■□□□□ 0.92
ATN1P54259 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
ATN1P54259 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATN1P54259 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms