Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
HADHAP40939 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HADHAP40939 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HADHAP40939 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HADHAP40939 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.12■□□□□ 0.65
HADHAP40939 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HADHAP40939 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
HADHAP40939 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HADHAP40939 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
HADHAP40939 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.12■□□□□ 0.65
HADHAP40939 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HADHAP40939 MIR718-201ENST00000390190 70 ntBASIC19.12■□□□□ 0.65
HADHAP40939 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HADHAP40939 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.12■□□□□ 0.65
HADHAP40939 AC004951.3-201ENST00000418645 1148 ntBASIC19.12■□□□□ 0.65
HADHAP40939 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.12■□□□□ 0.65
HADHAP40939 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.12■□□□□ 0.65
HADHAP40939 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.12■□□□□ 0.65
HADHAP40939 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.12■□□□□ 0.65
HADHAP40939 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.12■□□□□ 0.65
HADHAP40939 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
HADHAP40939 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HADHAP40939 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HADHAP40939 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HADHAP40939 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HADHAP40939 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.11■□□□□ 0.65
HADHAP40939 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HADHAP40939 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HADHAP40939 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HADHAP40939 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HADHAP40939 AC079598.2-202ENST00000546624 1451 ntBASIC19.11■□□□□ 0.65
HADHAP40939 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.11■□□□□ 0.65
HADHAP40939 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 FAM197Y1-201ENST00000421178 764 ntBASIC19.11■□□□□ 0.65
HADHAP40939 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.11■□□□□ 0.65
HADHAP40939 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.11■□□□□ 0.65
HADHAP40939 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.11■□□□□ 0.65
HADHAP40939 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.11■□□□□ 0.65
HADHAP40939 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
HADHAP40939 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.11■□□□□ 0.65
HADHAP40939 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
HADHAP40939 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HADHAP40939 RCC2P6-201ENST00000526625 1557 ntBASIC19.1■□□□□ 0.65
HADHAP40939 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.1■□□□□ 0.65
HADHAP40939 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.1■□□□□ 0.65
HADHAP40939 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HADHAP40939 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.1■□□□□ 0.65
HADHAP40939 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.1■□□□□ 0.65
HADHAP40939 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.1■□□□□ 0.65
HADHAP40939 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.1■□□□□ 0.65
HADHAP40939 AL049637.2-201ENST00000641778 930 ntBASIC19.1■□□□□ 0.65
HADHAP40939 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.1■□□□□ 0.65
HADHAP40939 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HADHAP40939 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
HADHAP40939 FSCN1P1-201ENST00000568912 1481 ntBASIC19.09■□□□□ 0.65
HADHAP40939 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.09■□□□□ 0.65
HADHAP40939 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HADHAP40939 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HADHAP40939 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.09■□□□□ 0.65
HADHAP40939 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 TSPY23P-201ENST00000440136 739 ntBASIC19.09■□□□□ 0.65
HADHAP40939 AC008550.1-201ENST00000511500 884 ntBASIC19.09■□□□□ 0.65
HADHAP40939 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HADHAP40939 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HADHAP40939 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HADHAP40939 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HADHAP40939 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HADHAP40939 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms