Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX1P22670 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX1P22670 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RFX1P22670 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RFX1P22670 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX1P22670 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RFX1P22670 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RFX1P22670 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX1P22670 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX1P22670 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX1P22670 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX1P22670 TSPY23P-201ENST00000440136 739 ntBASIC20.56■□□□□ 0.88
RFX1P22670 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.56■□□□□ 0.88
RFX1P22670 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.56■□□□□ 0.88
RFX1P22670 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.56■□□□□ 0.88
RFX1P22670 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.56■□□□□ 0.88
RFX1P22670 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX1P22670 KRT8P41-201ENST00000533985 1514 ntBASIC20.56■□□□□ 0.88
RFX1P22670 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RFX1P22670 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RFX1P22670 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RFX1P22670 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX1P22670 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX1P22670 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RFX1P22670 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.55■□□□□ 0.88
RFX1P22670 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX1P22670 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX1P22670 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX1P22670 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX1P22670 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX1P22670 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX1P22670 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX1P22670 NIFKP9-201ENST00000419265 221 ntBASIC20.54■□□□□ 0.88
RFX1P22670 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX1P22670 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFX1P22670 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX1P22670 Z85996.1-201ENST00000494644 937 ntBASIC20.54■□□□□ 0.88
RFX1P22670 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX1P22670 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX1P22670 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
RFX1P22670 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RFX1P22670 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX1P22670 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RFX1P22670 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RFX1P22670 AC083906.6-201ENST00000641366 219 ntBASIC20.54■□□□□ 0.88
RFX1P22670 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX1P22670 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RFX1P22670 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX1P22670 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX1P22670 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX1P22670 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX1P22670 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX1P22670 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX1P22670 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RFX1P22670 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.53■□□□□ 0.88
RFX1P22670 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX1P22670 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFX1P22670 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFX1P22670 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms