Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATP2A2P16615 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ATP2A2P16615 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATP2A2P16615 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A2P16615 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A2P16615 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A2P16615 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A2P16615 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A2P16615 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ATP2A2P16615 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A2P16615 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP2A2P16615 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A2P16615 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A2P16615 SPDYE13P-201ENST00000445314 798 ntBASIC20.84■□□□□ 0.93
ATP2A2P16615 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP2A2P16615 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A2P16615 AC111152.3-201ENST00000569699 673 ntBASIC20.84■□□□□ 0.93
ATP2A2P16615 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A2P16615 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A2P16615 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A2P16615 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ATP2A2P16615 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ATP2A2P16615 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A2P16615 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A2P16615 AC087289.5-201ENST00000586076 3175 ntBASIC20.83■□□□□ 0.93
ATP2A2P16615 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A2P16615 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A2P16615 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A2P16615 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A2P16615 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2A2P16615 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP2A2P16615 PVRIG2P-201ENST00000435460 978 ntBASIC20.83■□□□□ 0.93
ATP2A2P16615 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP2A2P16615 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.83■□□□□ 0.93
ATP2A2P16615 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A2P16615 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP2A2P16615 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A2P16615 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP2A2P16615 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP2A2P16615 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP2A2P16615 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A2P16615 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A2P16615 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP2A2P16615 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A2P16615 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP2A2P16615 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ATP2A2P16615 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATP2A2P16615 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 AL645929.1-201ENST00000420084 975 ntBASIC20.82■□□□□ 0.92
ATP2A2P16615 AP000347.1-202ENST00000435868 847 ntBASIC20.82■□□□□ 0.92
ATP2A2P16615 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2A2P16615 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A2P16615 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A2P16615 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP2A2P16615 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A2P16615 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ATP2A2P16615 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A2P16615 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP2A2P16615 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP2A2P16615 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A2P16615 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP2A2P16615 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP2A2P16615 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP2A2P16615 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP2A2P16615 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP2A2P16615 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms