Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.08■■□□□ 1.12
COL2A1P02458 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
COL2A1P02458 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.08■■□□□ 1.12
COL2A1P02458 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.08■■□□□ 1.12
COL2A1P02458 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.08■■□□□ 1.12
COL2A1P02458 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.08■■□□□ 1.12
COL2A1P02458 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL2A1P02458 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.08■■□□□ 1.12
COL2A1P02458 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.07■■□□□ 1.12
COL2A1P02458 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.07■■□□□ 1.12
COL2A1P02458 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL2A1P02458 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL2A1P02458 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL2A1P02458 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.07■■□□□ 1.12
COL2A1P02458 RNF126P1-202ENST00000569893 925 ntBASIC22.07■■□□□ 1.12
COL2A1P02458 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.07■■□□□ 1.12
COL2A1P02458 AC092329.2-201ENST00000598402 547 ntBASIC22.07■■□□□ 1.12
COL2A1P02458 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
COL2A1P02458 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
COL2A1P02458 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL2A1P02458 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.07■■□□□ 1.12
COL2A1P02458 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL2A1P02458 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL2A1P02458 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.07■■□□□ 1.12
COL2A1P02458 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
COL2A1P02458 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.07■■□□□ 1.12
COL2A1P02458 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
COL2A1P02458 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL2A1P02458 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.06■■□□□ 1.12
COL2A1P02458 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
COL2A1P02458 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL2A1P02458 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.06■■□□□ 1.12
COL2A1P02458 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.06■■□□□ 1.12
COL2A1P02458 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL2A1P02458 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.06■■□□□ 1.12
COL2A1P02458 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.06■■□□□ 1.12
COL2A1P02458 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.06■■□□□ 1.12
COL2A1P02458 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
COL2A1P02458 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL2A1P02458 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.06■■□□□ 1.12
COL2A1P02458 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
COL2A1P02458 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.05■■□□□ 1.12
COL2A1P02458 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 AC006333.2-201ENST00000607957 2099 ntBASIC22.05■■□□□ 1.12
COL2A1P02458 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.05■■□□□ 1.12
COL2A1P02458 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.05■■□□□ 1.12
COL2A1P02458 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
COL2A1P02458 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 AC026396.1-201ENST00000419388 421 ntBASIC22.05■■□□□ 1.12
COL2A1P02458 DRAXINP1-201ENST00000437611 948 ntBASIC22.05■■□□□ 1.12
COL2A1P02458 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 TPSP2-201ENST00000561760 610 ntBASIC22.05■■□□□ 1.12
COL2A1P02458 MIR3652-201ENST00000579335 131 ntBASIC22.05■■□□□ 1.12
COL2A1P02458 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.05■■□□□ 1.12
COL2A1P02458 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
COL2A1P02458 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.05■■□□□ 1.12
COL2A1P02458 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC22.05■■□□□ 1.12
COL2A1P02458 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.05■■□□□ 1.12
COL2A1P02458 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.05■■□□□ 1.12
COL2A1P02458 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.05■■□□□ 1.12
COL2A1P02458 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.05■■□□□ 1.12
COL2A1P02458 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL2A1P02458 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL2A1P02458 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 TSPY22P-201ENST00000427496 604 ntBASIC22.04■■□□□ 1.12
COL2A1P02458 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL2A1P02458 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.04■■□□□ 1.12
COL2A1P02458 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 KRT18P41-201ENST00000518924 1277 ntBASIC22.04■■□□□ 1.12
COL2A1P02458 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
COL2A1P02458 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.04■■□□□ 1.12
COL2A1P02458 AP002414.4-201ENST00000589764 1148 ntBASIC22.04■■□□□ 1.12
COL2A1P02458 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.04■■□□□ 1.12
COL2A1P02458 AL390719.2-201ENST00000606993 987 ntBASIC22.04■■□□□ 1.12
COL2A1P02458 AL691432.3-201ENST00000621860 400 ntBASIC22.04■■□□□ 1.12
COL2A1P02458 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.04■■□□□ 1.12
COL2A1P02458 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL2A1P02458 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.04■■□□□ 1.12
COL2A1P02458 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL2A1P02458 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL2A1P02458 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
COL2A1P02458 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL2A1P02458 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.03■■□□□ 1.12
COL2A1P02458 PP7080-204ENST00000510714 601 ntTSL 3 BASIC22.03■■□□□ 1.12
COL2A1P02458 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.03■■□□□ 1.12
COL2A1P02458 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms