Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.45■□□□□ 0.38
NKX2-2O95096 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NKX2-2O95096 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.45■□□□□ 0.38
NKX2-2O95096 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 AIRN-201ENST00000601203 4374 ntBASIC17.45■□□□□ 0.38
NKX2-2O95096 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 AC079598.2-202ENST00000546624 1451 ntBASIC17.44■□□□□ 0.38
NKX2-2O95096 ANO7L1-203ENST00000602586 1720 ntBASIC17.44■□□□□ 0.38
NKX2-2O95096 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NKX2-2O95096 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NKX2-2O95096 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.44■□□□□ 0.38
NKX2-2O95096 MTMR9LP-203ENST00000426597 1545 ntBASIC17.44■□□□□ 0.38
NKX2-2O95096 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NKX2-2O95096 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NKX2-2O95096 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.44■□□□□ 0.38
NKX2-2O95096 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
NKX2-2O95096 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NKX2-2O95096 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.44■□□□□ 0.38
NKX2-2O95096 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX2-2O95096 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.44■□□□□ 0.38
NKX2-2O95096 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.43■□□□□ 0.38
NKX2-2O95096 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.43■□□□□ 0.38
NKX2-2O95096 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.43■□□□□ 0.38
NKX2-2O95096 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.43■□□□□ 0.38
NKX2-2O95096 AL355075.4-201ENST00000554988 638 ntBASIC17.43■□□□□ 0.38
NKX2-2O95096 FITM1-202ENST00000559294 800 ntBASIC17.43■□□□□ 0.38
NKX2-2O95096 AC008622.2-201ENST00000617006 1229 ntBASIC17.43■□□□□ 0.38
NKX2-2O95096 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.43■□□□□ 0.38
NKX2-2O95096 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NKX2-2O95096 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.43■□□□□ 0.38
NKX2-2O95096 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.43■□□□□ 0.38
NKX2-2O95096 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
NKX2-2O95096 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX2-2O95096 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX2-2O95096 RCC2P3-201ENST00000418112 1537 ntBASIC17.42■□□□□ 0.38
NKX2-2O95096 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.42■□□□□ 0.38
NKX2-2O95096 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
NKX2-2O95096 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX2-2O95096 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX2-2O95096 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.42■□□□□ 0.38
NKX2-2O95096 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.42■□□□□ 0.38
NKX2-2O95096 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.42■□□□□ 0.38
NKX2-2O95096 AP000525.1-201ENST00000608286 694 ntBASIC17.42■□□□□ 0.38
NKX2-2O95096 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.42■□□□□ 0.38
NKX2-2O95096 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.42■□□□□ 0.38
NKX2-2O95096 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.42■□□□□ 0.38
NKX2-2O95096 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX2-2O95096 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NKX2-2O95096 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NKX2-2O95096 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX2-2O95096 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NKX2-2O95096 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
NKX2-2O95096 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX2-2O95096 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.41■□□□□ 0.38
NKX2-2O95096 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NKX2-2O95096 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms