Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.12■□□□□ 0.65
USP1O94782 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 Z85996.1-201ENST00000494644 937 ntBASIC19.12■□□□□ 0.65
USP1O94782 AC006058.3-201ENST00000606217 1069 ntBASIC19.12■□□□□ 0.65
USP1O94782 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
USP1O94782 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
USP1O94782 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP1O94782 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP1O94782 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP1O94782 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.11■□□□□ 0.65
USP1O94782 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.11■□□□□ 0.65
USP1O94782 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.11■□□□□ 0.65
USP1O94782 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 AC018470.1-201ENST00000624790 3129 ntBASIC19.11■□□□□ 0.65
USP1O94782 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
USP1O94782 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.11■□□□□ 0.65
USP1O94782 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.11■□□□□ 0.65
USP1O94782 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.11■□□□□ 0.65
USP1O94782 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
USP1O94782 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.11■□□□□ 0.65
USP1O94782 RN7SL471P-201ENST00000580476 299 ntBASIC19.11■□□□□ 0.65
USP1O94782 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.11■□□□□ 0.65
USP1O94782 AC110285.5-201ENST00000611501 352 ntBASIC19.11■□□□□ 0.65
USP1O94782 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 AC073648.6-201ENST00000641589 218 ntBASIC19.11■□□□□ 0.65
USP1O94782 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 AC020763.4-201ENST00000623414 4170 ntBASIC19.11■□□□□ 0.65
USP1O94782 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.11■□□□□ 0.65
USP1O94782 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.11■□□□□ 0.65
USP1O94782 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.11■□□□□ 0.65
USP1O94782 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP1O94782 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.1■□□□□ 0.65
USP1O94782 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.1■□□□□ 0.65
USP1O94782 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.1■□□□□ 0.65
USP1O94782 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.1■□□□□ 0.65
USP1O94782 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.1■□□□□ 0.65
USP1O94782 AL445675.2-201ENST00000620291 557 ntBASIC19.1■□□□□ 0.65
USP1O94782 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USP1O94782 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP1O94782 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 AC009113.1-201ENST00000570267 2443 ntBASIC19.09■□□□□ 0.65
USP1O94782 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
USP1O94782 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.09■□□□□ 0.65
USP1O94782 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.09■□□□□ 0.65
USP1O94782 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.09■□□□□ 0.65
USP1O94782 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
USP1O94782 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.09■□□□□ 0.65
USP1O94782 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP1O94782 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.09■□□□□ 0.65
USP1O94782 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.09■□□□□ 0.65
USP1O94782 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms