Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
BEST1O76090 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BEST1O76090 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BEST1O76090 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.83■□□□□ 0.77
BEST1O76090 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BEST1O76090 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BEST1O76090 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.83■□□□□ 0.77
BEST1O76090 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
BEST1O76090 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BEST1O76090 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
BEST1O76090 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BEST1O76090 BX664615.1-201ENST00000443558 458 ntBASIC19.83■□□□□ 0.77
BEST1O76090 MCCD1P1-208ENST00000445732 328 ntBASIC19.83■□□□□ 0.77
BEST1O76090 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BEST1O76090 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
BEST1O76090 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.83■□□□□ 0.77
BEST1O76090 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.83■□□□□ 0.77
BEST1O76090 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
BEST1O76090 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BEST1O76090 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.83■□□□□ 0.76
BEST1O76090 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BEST1O76090 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BEST1O76090 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
BEST1O76090 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.82■□□□□ 0.76
BEST1O76090 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.82■□□□□ 0.76
BEST1O76090 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.82■□□□□ 0.76
BEST1O76090 MIR1224-201ENST00000408193 85 ntBASIC19.82■□□□□ 0.76
BEST1O76090 DUX4L26-201ENST00000489078 1255 ntBASIC19.82■□□□□ 0.76
BEST1O76090 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.82■□□□□ 0.76
BEST1O76090 WWOX-216ENST00000569818 525 ntBASIC19.82■□□□□ 0.76
BEST1O76090 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
BEST1O76090 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.82■□□□□ 0.76
BEST1O76090 AC010331.1-201ENST00000611423 582 ntBASIC19.82■□□□□ 0.76
BEST1O76090 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
BEST1O76090 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 AC068587.9-201ENST00000641814 219 ntBASIC19.82■□□□□ 0.76
BEST1O76090 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.82■□□□□ 0.76
BEST1O76090 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
BEST1O76090 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BEST1O76090 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BEST1O76090 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
BEST1O76090 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
BEST1O76090 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.81■□□□□ 0.76
BEST1O76090 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.81■□□□□ 0.76
BEST1O76090 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.81■□□□□ 0.76
BEST1O76090 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.81■□□□□ 0.76
BEST1O76090 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
BEST1O76090 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.81■□□□□ 0.76
BEST1O76090 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.81■□□□□ 0.76
BEST1O76090 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 YBX1P2-201ENST00000489612 999 ntBASIC19.81■□□□□ 0.76
BEST1O76090 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.81■□□□□ 0.76
BEST1O76090 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.81■□□□□ 0.76
BEST1O76090 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.81■□□□□ 0.76
BEST1O76090 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
BEST1O76090 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.81■□□□□ 0.76
BEST1O76090 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.81■□□□□ 0.76
BEST1O76090 AC011558.1-201ENST00000623459 338 ntBASIC19.81■□□□□ 0.76
BEST1O76090 AL023973.1-201ENST00000624619 620 ntBASIC19.81■□□□□ 0.76
BEST1O76090 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
BEST1O76090 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 AL109659.2-201ENST00000606809 1674 ntBASIC19.81■□□□□ 0.76
BEST1O76090 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BEST1O76090 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
BEST1O76090 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST1O76090 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST1O76090 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST1O76090 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST1O76090 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.8■□□□□ 0.76
BEST1O76090 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST1O76090 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BEST1O76090 COX11P1-201ENST00000489116 835 ntBASIC19.8■□□□□ 0.76
BEST1O76090 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms