Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.9■□□□□ 0.62
LDB2O43679 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB2O43679 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LDB2O43679 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB2O43679 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.9■□□□□ 0.62
LDB2O43679 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.9■□□□□ 0.62
LDB2O43679 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB2O43679 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
LDB2O43679 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB2O43679 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB2O43679 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.89■□□□□ 0.62
LDB2O43679 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
LDB2O43679 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LDB2O43679 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.89■□□□□ 0.61
LDB2O43679 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 CRYGFP-201ENST00000418459 633 ntBASIC18.89■□□□□ 0.61
LDB2O43679 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.89■□□□□ 0.61
LDB2O43679 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.89■□□□□ 0.61
LDB2O43679 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.89■□□□□ 0.61
LDB2O43679 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.89■□□□□ 0.61
LDB2O43679 AP005242.2-201ENST00000580065 1175 ntBASIC18.89■□□□□ 0.61
LDB2O43679 MIR4497-201ENST00000583208 89 ntBASIC18.89■□□□□ 0.61
LDB2O43679 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.89■□□□□ 0.61
LDB2O43679 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 AC079598.2-202ENST00000546624 1451 ntBASIC18.89■□□□□ 0.61
LDB2O43679 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.89■□□□□ 0.61
LDB2O43679 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.89■□□□□ 0.61
LDB2O43679 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LDB2O43679 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
LDB2O43679 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.88■□□□□ 0.61
LDB2O43679 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 UNC93B2-201ENST00000285383 730 ntBASIC18.88■□□□□ 0.61
LDB2O43679 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LDB2O43679 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.88■□□□□ 0.61
LDB2O43679 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 AL355075.4-201ENST00000554988 638 ntBASIC18.88■□□□□ 0.61
LDB2O43679 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.88■□□□□ 0.61
LDB2O43679 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.88■□□□□ 0.61
LDB2O43679 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.88■□□□□ 0.61
LDB2O43679 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.88■□□□□ 0.61
LDB2O43679 AC008622.2-201ENST00000617006 1229 ntBASIC18.88■□□□□ 0.61
LDB2O43679 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.88■□□□□ 0.61
LDB2O43679 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 MTMR9LP-203ENST00000426597 1545 ntBASIC18.88■□□□□ 0.61
LDB2O43679 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.88■□□□□ 0.61
LDB2O43679 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.88■□□□□ 0.61
LDB2O43679 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.88■□□□□ 0.61
LDB2O43679 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LDB2O43679 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.88■□□□□ 0.61
LDB2O43679 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LDB2O43679 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LDB2O43679 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LDB2O43679 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.88■□□□□ 0.61
LDB2O43679 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.87■□□□□ 0.61
LDB2O43679 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 KRT17P2-201ENST00000300992 1314 ntBASIC18.87■□□□□ 0.61
LDB2O43679 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.87■□□□□ 0.61
LDB2O43679 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.87■□□□□ 0.61
LDB2O43679 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.87■□□□□ 0.61
LDB2O43679 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.87■□□□□ 0.61
LDB2O43679 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.87■□□□□ 0.61
LDB2O43679 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
LDB2O43679 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LDB2O43679 ANO7L1-203ENST00000602586 1720 ntBASIC18.87■□□□□ 0.61
LDB2O43679 AP000525.1-201ENST00000608286 694 ntBASIC18.87■□□□□ 0.61
LDB2O43679 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms