Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 NAT14-202ENST00000587400 416 ntTSL 5 BASIC26.31■■□□□ 1.8
CHD2O14647 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC26.31■■□□□ 1.8
CHD2O14647 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC26.31■■□□□ 1.8
CHD2O14647 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD2O14647 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD2O14647 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC26.31■■□□□ 1.8
CHD2O14647 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD2O14647 AL162377.1-201ENST00000618844 1793 ntBASIC26.31■■□□□ 1.8
CHD2O14647 KRT89P-201ENST00000620027 1478 ntBASIC26.31■■□□□ 1.8
CHD2O14647 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC26.3■■□□□ 1.8
CHD2O14647 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.3■■□□□ 1.8
CHD2O14647 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 BX842568.4-201ENST00000421222 227 ntBASIC26.3■■□□□ 1.8
CHD2O14647 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC26.3■■□□□ 1.8
CHD2O14647 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
CHD2O14647 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC26.3■■□□□ 1.8
CHD2O14647 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CHD2O14647 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CHD2O14647 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CHD2O14647 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CHD2O14647 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC26.3■■□□□ 1.8
CHD2O14647 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CHD2O14647 GUSBP12-201ENST00000513727 720 ntBASIC26.3■■□□□ 1.8
CHD2O14647 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC26.3■■□□□ 1.8
CHD2O14647 RCC2P3-201ENST00000418112 1537 ntBASIC26.3■■□□□ 1.8
CHD2O14647 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD2O14647 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.29■■□□□ 1.8
CHD2O14647 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD2O14647 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD2O14647 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD2O14647 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD2O14647 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC26.29■■□□□ 1.8
CHD2O14647 FAM220CP-201ENST00000395253 831 ntBASIC26.29■■□□□ 1.8
CHD2O14647 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD2O14647 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD2O14647 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CHD2O14647 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD2O14647 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC26.29■■□□□ 1.8
CHD2O14647 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CHD2O14647 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC26.28■■□□□ 1.8
CHD2O14647 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC26.28■■□□□ 1.8
CHD2O14647 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC26.28■■□□□ 1.8
CHD2O14647 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC26.28■■□□□ 1.8
CHD2O14647 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD2O14647 AC139887.3-201ENST00000568585 713 ntBASIC26.28■■□□□ 1.8
CHD2O14647 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD2O14647 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC26.28■■□□□ 1.8
CHD2O14647 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CHD2O14647 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC26.28■■□□□ 1.8
CHD2O14647 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.28■■□□□ 1.8
CHD2O14647 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC26.28■■□□□ 1.8
CHD2O14647 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD2O14647 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CHD2O14647 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC26.27■■□□□ 1.8
CHD2O14647 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC26.27■■□□□ 1.8
CHD2O14647 AC009065.1-201ENST00000564055 1225 ntBASIC26.27■■□□□ 1.8
CHD2O14647 LITAF-211ENST00000572255 516 ntTSL 4 BASIC26.27■■□□□ 1.8
CHD2O14647 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
CHD2O14647 AC024563.2-201ENST00000603282 481 ntBASIC26.27■■□□□ 1.8
CHD2O14647 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD2O14647 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHD2O14647 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD2O14647 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CHD2O14647 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD2O14647 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC26.26■■□□□ 1.79
CHD2O14647 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD2O14647 AF186996.4-201ENST00000467186 377 ntBASIC26.26■■□□□ 1.79
CHD2O14647 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.26■■□□□ 1.79
CHD2O14647 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC26.26■■□□□ 1.79
CHD2O14647 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHD2O14647 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHD2O14647 AC005336.2-201ENST00000593183 939 ntBASIC26.26■■□□□ 1.79
CHD2O14647 TERC-201ENST00000602385 541 ntBASIC26.26■■□□□ 1.79
CHD2O14647 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms