Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDC7O00311 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CDC7O00311 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CDC7O00311 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC7O00311 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC7O00311 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.55■□□□□ 0.56
CDC7O00311 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.55■□□□□ 0.56
CDC7O00311 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.55■□□□□ 0.56
CDC7O00311 PRSS44-201ENST00000515154 1146 ntBASIC18.55■□□□□ 0.56
CDC7O00311 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC7O00311 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.55■□□□□ 0.56
CDC7O00311 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.55■□□□□ 0.56
CDC7O00311 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.55■□□□□ 0.56
CDC7O00311 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.55■□□□□ 0.56
CDC7O00311 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.55■□□□□ 0.56
CDC7O00311 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.55■□□□□ 0.56
CDC7O00311 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDC7O00311 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.55■□□□□ 0.56
CDC7O00311 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDC7O00311 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDC7O00311 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.55■□□□□ 0.56
CDC7O00311 AC005082.1-201ENST00000413042 2259 ntBASIC18.54■□□□□ 0.56
CDC7O00311 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC7O00311 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC7O00311 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC7O00311 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC7O00311 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 FAM197Y1-201ENST00000421178 764 ntBASIC18.54■□□□□ 0.56
CDC7O00311 AL158047.1-201ENST00000445918 881 ntBASIC18.54■□□□□ 0.56
CDC7O00311 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC7O00311 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.54■□□□□ 0.56
CDC7O00311 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDC7O00311 AC026271.3-201ENST00000571884 352 ntBASIC18.54■□□□□ 0.56
CDC7O00311 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.54■□□□□ 0.56
CDC7O00311 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.54■□□□□ 0.56
CDC7O00311 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.54■□□□□ 0.56
CDC7O00311 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.54■□□□□ 0.56
CDC7O00311 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.54■□□□□ 0.56
CDC7O00311 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDC7O00311 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDC7O00311 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDC7O00311 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.53■□□□□ 0.56
CDC7O00311 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.53■□□□□ 0.56
CDC7O00311 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.53■□□□□ 0.56
CDC7O00311 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.53■□□□□ 0.56
CDC7O00311 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.53■□□□□ 0.56
CDC7O00311 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.53■□□□□ 0.56
CDC7O00311 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDC7O00311 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.53■□□□□ 0.56
CDC7O00311 AC130371.2-201ENST00000619443 611 ntBASIC18.53■□□□□ 0.56
CDC7O00311 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDC7O00311 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDC7O00311 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CDC7O00311 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC7O00311 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDC7O00311 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC7O00311 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC7O00311 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC7O00311 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDC7O00311 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms