Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.99□□□□□ -2.09
PCDHAC2Q9Y5I4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 SNORD113-1-201ENST00000365321 69 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 MIR1323-201ENST00000408090 73 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 RNU6-394P-201ENST00000410735 107 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 MTATP6P29-201ENST00000415057 132 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 SNORD2.1-201ENST00000458762 69 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 AC091021.1-201ENST00000468051 388 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 MIR4282-201ENST00000583613 67 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 snoZ196.1-201ENST00000625269 89 ntBASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
PCDHAC2Q9Y5I4 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
PCDHAC2Q9Y5I4 SNORA53-201ENST00000391141 249 ntBASIC1.97□□□□□ -2.09
PCDHAC2Q9Y5I4 RNU2-61P-201ENST00000411069 191 ntBASIC1.97□□□□□ -2.09
PCDHAC2Q9Y5I4 SNORA27.4-201ENST00000516650 95 ntBASIC1.97□□□□□ -2.09
PCDHAC2Q9Y5I4 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
PCDHAC2Q9Y5I4 AC025647.1-201ENST00000517879 253 ntBASIC1.97□□□□□ -2.09
PCDHAC2Q9Y5I4 AL162424.1-201ENST00000602325 221 ntBASIC1.97□□□□□ -2.09
PCDHAC2Q9Y5I4 AL391516.1-201ENST00000554380 2449 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 SNORA25.1-201ENST00000362326 128 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-1290P-201ENST00000362957 109 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-1020P-201ENST00000363684 107 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-801P-201ENST00000364087 105 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-704P-201ENST00000364162 103 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 SNORD114-6-201ENST00000364393 72 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 Y_RNA.233-201ENST00000364407 101 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 SNORA20B-201ENST00000384220 132 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-160P-201ENST00000384591 107 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-131P-201ENST00000391144 107 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 Y_RNA.590-201ENST00000410140 107 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 SNORD65B-201ENST00000459126 73 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 Y_RNA.637-201ENST00000459424 114 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-498P-201ENST00000459468 107 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 AP005660.1-201ENST00000522972 293 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 AC007229.1-201ENST00000590455 412 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 AL008718.3-201ENST00000610217 321 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 snoU18.1-201ENST00000629629 71 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 AC008555.8-201ENST00000623602 2168 ntBASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PCDHAC2Q9Y5I4 AL159152.1-201ENST00000635019 2587 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-60P-201ENST00000364792 103 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU11-3P-201ENST00000391111 133 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 SNORA26.5-201ENST00000391215 123 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 AC024067.1-201ENST00000426199 223 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 TMSB4XP3-201ENST00000445144 114 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 Y_RNA.679-201ENST00000516416 91 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 AC015720.1-201ENST00000565251 277 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.95□□□□□ -2.1
PCDHAC2Q9Y5I4 AC100821.1-201ENST00000523153 2479 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-23P-201ENST00000363283 107 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU4-13P-201ENST00000364019 141 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 Y_RNA.572-201ENST00000384757 98 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 MIR29C-201ENST00000385231 88 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 MIR1253-201ENST00000408273 105 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 AC060773.1-201ENST00000421698 310 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 AL357134.1-201ENST00000445848 426 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 Y_RNA.662-201ENST00000516028 97 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-856P-201ENST00000516959 98 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 SNORA31.25-201ENST00000517242 134 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU2-19P-201ENST00000517288 84 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 MIR4529-201ENST00000578110 78 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 AC022513.1-201ENST00000624512 117 ntBASIC1.94□□□□□ -2.1
PCDHAC2Q9Y5I4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 SNORA27.1-201ENST00000362604 124 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-1272P-201ENST00000362776 107 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-324P-201ENST00000363957 106 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-1048P-201ENST00000364054 107 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU4-10P-201ENST00000364383 140 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 Y_RNA.240-201ENST00000364469 95 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 Y_RNA.310-201ENST00000365063 113 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 MIR613-201ENST00000385248 95 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU6-763P-201ENST00000390865 106 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 BX510359.4-201ENST00000423750 193 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 U8.19-201ENST00000459095 133 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 RNU2-34P-201ENST00000516534 121 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 AC027419.1-201ENST00000522976 328 ntBASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCDHAC2Q9Y5I4 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms