Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.6□□□□□ -1.99
SF3B6Q9Y3B4 FAM35CP-201ENST00000554755 2470 ntBASIC2.6□□□□□ -1.99
SF3B6Q9Y3B4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SF3B6Q9Y3B4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 Y_RNA.114-201ENST00000363265 113 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 MIR548A2-201ENST00000384956 97 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 AC107083.1-201ENST00000439643 279 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 SNRPGP13-201ENST00000442212 177 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 RN7SL504P-201ENST00000494496 287 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 SNORA31.26-201ENST00000517250 137 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 AC090049.2-201ENST00000550377 109 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 MIR3121-201ENST00000579680 77 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 MIR4762-201ENST00000585261 75 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 AC069114.2-201ENST00000604699 304 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 AC091953.5-201ENST00000622919 233 ntBASIC2.59□□□□□ -1.99
SF3B6Q9Y3B4 Y_RNA.81-201ENST00000362997 102 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 U8.5-201ENST00000364528 136 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 MIR483-201ENST00000385070 76 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 MIR891A-201ENST00000401237 79 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 AL603914.1-201ENST00000401964 204 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 MIR1283-2-201ENST00000408621 87 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 AL158823.1-201ENST00000418441 478 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.58□□□□□ -2
SF3B6Q9Y3B4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
SF3B6Q9Y3B4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.58□□□□□ -2
SF3B6Q9Y3B4 RNA5SP137-201ENST00000516833 135 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 AC107016.2-201ENST00000547968 190 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.58□□□□□ -2
SF3B6Q9Y3B4 AL161756.2-201ENST00000604597 246 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 MIR8054-201ENST00000620877 86 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 MIR8057-201ENST00000620957 69 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.58□□□□□ -2
SF3B6Q9Y3B4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SF3B6Q9Y3B4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SF3B6Q9Y3B4 MTND5P32-201ENST00000560711 1802 ntBASIC2.58□□□□□ -2
SF3B6Q9Y3B4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SF3B6Q9Y3B4 SNORD14E-201ENST00000364009 85 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 MIR518F-201ENST00000384973 87 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 RNU6-440P-201ENST00000390882 105 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 RNA5SP482-201ENST00000391269 118 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 HMGN2P3-201ENST00000433603 273 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 HMGN2P5-201ENST00000436882 273 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 STAG3L5P-204ENST00000443759 179 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 AL158147.1-201ENST00000443970 75 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 RN7SKP179-201ENST00000516126 217 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.57□□□□□ -2
SF3B6Q9Y3B4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.57□□□□□ -2
SF3B6Q9Y3B4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.57□□□□□ -2
SF3B6Q9Y3B4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SF3B6Q9Y3B4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SF3B6Q9Y3B4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.56□□□□□ -2
SF3B6Q9Y3B4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.56□□□□□ -2
SF3B6Q9Y3B4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
SF3B6Q9Y3B4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 Y_RNA.280-201ENST00000364765 112 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 RNU6-215P-201ENST00000365169 102 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 SNORA9-201ENST00000384215 133 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 MIR512-1-201ENST00000384913 84 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 SNORD77.3-201ENST00000391113 65 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 MIR548O-201ENST00000408583 114 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.56□□□□□ -2
SF3B6Q9Y3B4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.56□□□□□ -2
SF3B6Q9Y3B4 RNU6-772P-201ENST00000516042 105 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 SNORA31.10-201ENST00000516482 106 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 SNORD45.4-201ENST00000516629 73 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.56□□□□□ -2
SF3B6Q9Y3B4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.56□□□□□ -2
SF3B6Q9Y3B4 AL391516.1-201ENST00000554380 2449 ntBASIC2.56□□□□□ -2
SF3B6Q9Y3B4 MIR22-201ENST00000362190 85 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 MIR422A-201ENST00000362286 90 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 RNU6-442P-201ENST00000383968 104 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 SNORA54-201ENST00000384281 123 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 MIR518A2-201ENST00000384966 87 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.55□□□□□ -2
SF3B6Q9Y3B4 AF228730.3-201ENST00000436691 102 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.55□□□□□ -2
SF3B6Q9Y3B4 SCARNA13-201ENST00000516672 275 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 Y_RNA.712-201ENST00000517011 92 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 AL022345.2-201ENST00000606307 135 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 AL162274.2-201ENST00000614406 332 ntBASIC2.55□□□□□ -2
SF3B6Q9Y3B4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SF3B6Q9Y3B4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
SF3B6Q9Y3B4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.55□□□□□ -2
SF3B6Q9Y3B4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.54□□□□□ -2
SF3B6Q9Y3B4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SF3B6Q9Y3B4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SF3B6Q9Y3B4 RNA5SP374-201ENST00000362939 125 ntBASIC2.54□□□□□ -2
SF3B6Q9Y3B4 RNU6-268P-201ENST00000364174 107 ntBASIC2.54□□□□□ -2
SF3B6Q9Y3B4 Y_RNA.563-201ENST00000384707 108 ntBASIC2.54□□□□□ -2
SF3B6Q9Y3B4 HSPE1P9-201ENST00000440046 311 ntBASIC2.54□□□□□ -2
SF3B6Q9Y3B4 RNVU1-2-201ENST00000516326 135 ntBASIC2.54□□□□□ -2
SF3B6Q9Y3B4 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
SF3B6Q9Y3B4 SNORA74D-201ENST00000516404 141 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms