Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LEMD3Q9Y2U8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNU6-1209P-201ENST00000363655 107 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNU4-13P-201ENST00000364019 141 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 SNORA67.4-201ENST00000384688 142 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNU6-220P-201ENST00000390919 107 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNU6-57P-201ENST00000411348 103 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNA5SP282-201ENST00000516355 108 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNA5SP148-201ENST00000516527 94 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNU7-149P-201ENST00000516739 59 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNU6-365P-201ENST00000517113 106 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 MIR3605-201ENST00000583214 100 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 Pinc.1-201ENST00000616452 154 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 AL035470.1-201ENST00000622571 220 ntBASIC3.28□□□□□ -1.88
LEMD3Q9Y2U8 RNA5SP173-201ENST00000364857 136 ntBASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 SNORA1-201ENST00000384107 130 ntBASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 MIR562-201ENST00000384894 95 ntBASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 MIR570-201ENST00000384917 97 ntBASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 AC003685.2-201ENST00000422795 395 ntBASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 AL445687.1-201ENST00000439946 251 ntBASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 RNU7-14P-201ENST00000459331 62 ntBASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 AP003327.1-201ENST00000529684 127 ntBASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.27□□□□□ -1.89
LEMD3Q9Y2U8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-1014P-201ENST00000383940 103 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-975P-201ENST00000384296 105 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-440P-201ENST00000390882 105 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 AL590004.2-201ENST00000404787 371 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 RNA5SP508-201ENST00000411327 119 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 AC092427.1-202ENST00000430569 476 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 RPS4XP11-201ENST00000446897 772 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 AC091544.4-201ENST00000555268 342 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 MIR3129-201ENST00000581095 76 ntBASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.26□□□□□ -1.89
LEMD3Q9Y2U8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-944P-201ENST00000364023 107 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-1138P-201ENST00000365359 106 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-546P-201ENST00000383991 107 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 RNY1P7-201ENST00000384743 110 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 MIR561-201ENST00000385216 97 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 MIR300-201ENST00000401138 83 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 MIR1302-5-201ENST00000408164 150 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 RNA5SP344-201ENST00000411081 104 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 RPS29P6-201ENST00000438196 145 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 MTATP6P21-201ENST00000440681 189 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 ATP5EP1-201ENST00000510257 156 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 AC109329.2-201ENST00000519658 482 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 MIR4753-201ENST00000585119 83 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 MIR1245B-201ENST00000636115 69 ntBASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LEMD3Q9Y2U8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 RNA5SP432-201ENST00000362480 116 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-234P-201ENST00000365229 104 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-573P-201ENST00000383938 106 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 AC016909.1-201ENST00000415916 166 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 RPL39P34-201ENST00000477141 156 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 AP004217.1-201ENST00000480579 346 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 SNORA40.13-201ENST00000516379 120 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 SNORA9.3-201ENST00000516383 129 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-638P-201ENST00000516582 104 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 AC025647.1-201ENST00000517879 253 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 MIR2681-201ENST00000581814 105 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 AL355297.2-201ENST00000604792 129 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 AL590808.1-201ENST00000618696 141 ntBASIC3.24□□□□□ -1.89
LEMD3Q9Y2U8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 Y_RNA.366-201ENST00000365540 102 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 MIR181B1-201ENST00000385240 110 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 SNORA26-201ENST00000391286 122 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 AC023449.1-201ENST00000454464 154 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 OR9P1P-201ENST00000496431 281 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-109P-201ENST00000516364 107 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-184P-201ENST00000516514 107 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 RN7SKP282-201ENST00000516824 299 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 RNU6-94P-201ENST00000607728 107 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LEMD3Q9Y2U8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.22□□□□□ -1.89
LEMD3Q9Y2U8 SNORA63.5-201ENST00000363548 123 ntBASIC3.22□□□□□ -1.89
LEMD3Q9Y2U8 Y_RNA.323-201ENST00000365157 109 ntBASIC3.22□□□□□ -1.89
LEMD3Q9Y2U8 RNA5SP136-201ENST00000410906 107 ntBASIC3.22□□□□□ -1.89
LEMD3Q9Y2U8 RNA5SP281-201ENST00000516504 135 ntBASIC3.22□□□□□ -1.89
LEMD3Q9Y2U8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.22□□□□□ -1.89
LEMD3Q9Y2U8 U4atac.1-201ENST00000618345 95 ntBASIC3.22□□□□□ -1.89
LEMD3Q9Y2U8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms