Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SNORA63.5-201ENST00000363548 123 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 Y_RNA.163-201ENST00000363702 113 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 RNU1-96P-201ENST00000364163 162 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-805P-201ENST00000365643 106 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 SNORA51.5-201ENST00000384126 131 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 RNA5SP323-201ENST00000391094 133 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 MIR1302-5-201ENST00000408164 150 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 RNU2-63P-201ENST00000410792 194 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 COX6CP6-201ENST00000490840 228 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 AC023141.11-201ENST00000508864 202 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-240P-201ENST00000516098 97 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 AC104027.1-201ENST00000521887 300 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 AC107016.2-201ENST00000547968 190 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 AC009831.4-201ENST00000620744 325 ntBASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZC3H4Q9UPT8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 AC092427.1-202ENST00000430569 476 ntBASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 HMGN2P32-201ENST00000444648 269 ntBASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 RPS27P29-201ENST00000463110 252 ntBASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 AL355297.2-201ENST00000604792 129 ntBASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 AL591926.4-201ENST00000616895 298 ntBASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 ZNF271P-202ENST00000465539 1970 ntBASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 AC018630.2-201ENST00000534866 2403 ntBASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ZC3H4Q9UPT8 MIR340-201ENST00000362125 95 ntBASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-766P-201ENST00000362478 107 ntBASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-461P-201ENST00000364195 107 ntBASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 Y_RNA.242-201ENST00000364473 110 ntBASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 MIR548A2-201ENST00000384956 97 ntBASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 RNU1-142P-201ENST00000516682 145 ntBASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 RNU7-128P-201ENST00000517247 62 ntBASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 AL356280.1-201ENST00000603614 379 ntBASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.72□□□□□ -1.81
ZC3H4Q9UPT8 AL445687.1-201ENST00000439946 251 ntBASIC3.71□□□□□ -1.81
ZC3H4Q9UPT8 snoU13.26-201ENST00000459452 105 ntBASIC3.71□□□□□ -1.81
ZC3H4Q9UPT8 AC092185.1-201ENST00000491371 97 ntBASIC3.71□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-341P-201ENST00000516973 96 ntBASIC3.71□□□□□ -1.81
ZC3H4Q9UPT8 SNORA48.11-201ENST00000517015 89 ntBASIC3.71□□□□□ -1.81
ZC3H4Q9UPT8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZC3H4Q9UPT8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.71□□□□□ -1.82
ZC3H4Q9UPT8 AL589743.1-201ENST00000551932 2712 ntBASIC3.71□□□□□ -1.82
ZC3H4Q9UPT8 MIR518F-201ENST00000384973 87 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 AL117342.1-201ENST00000404861 406 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 RPL39P34-201ENST00000477141 156 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 AL035470.1-201ENST00000622571 220 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 SNORD68-201ENST00000363214 84 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 Y_RNA.328-201ENST00000365208 113 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 RNU6-690P-201ENST00000365242 106 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 SNORA8-201ENST00000384574 139 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 AC003685.2-201ENST00000422795 395 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 AL513328.1-201ENST00000446460 224 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 SCARNA15-202ENST00000516881 127 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 RNU6-667P-201ENST00000517186 102 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 MIR5197-201ENST00000583721 112 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 AC087685.1-201ENST00000587507 141 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 MIR376A2-201ENST00000636782 80 ntBASIC3.7□□□□□ -1.82
ZC3H4Q9UPT8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 Y_RNA.49-201ENST00000362714 112 ntBASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 RNU6-905P-201ENST00000384434 107 ntBASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 MIR548O-201ENST00000408583 114 ntBASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 AL049830.1-201ENST00000468034 425 ntBASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 RNU7-70P-201ENST00000516941 66 ntBASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 MIR7153-201ENST00000637758 57 ntBASIC3.69□□□□□ -1.82
ZC3H4Q9UPT8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 MIR148B-201ENST00000362252 99 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 SNORA1B-201ENST00000362535 133 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 SNORA33-201ENST00000363664 130 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 Y_RNA.348-201ENST00000365403 103 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 SNORA2.2-201ENST00000365473 135 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 SNORA51.10-201ENST00000384418 136 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 MIR95-201ENST00000385072 81 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 MIR887-201ENST00000401258 79 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 AC087499.2-201ENST00000432861 149 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 MIR338-201ENST00000636369 67 ntBASIC3.68□□□□□ -1.82
ZC3H4Q9UPT8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms