Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 VN1R88P-201ENST00000596787 292 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 MIR6740-201ENST00000618268 113 ntBASIC-1.29□□□□□ -2.62
CHD7Q9P2D1 SGO1P1-201ENST00000603525 1447 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 RNU6-878P-201ENST00000384578 110 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 AL359672.1-201ENST00000442302 409 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 FABP5P15-201ENST00000453566 214 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 AC005178.1-201ENST00000508392 440 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 MIR548AM-201ENST00000584298 74 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 RNU6-393P-201ENST00000384475 107 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 SNORD75.2-201ENST00000408784 58 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 AL158211.4-201ENST00000606988 584 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 AL391834.2-201ENST00000609982 546 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 snoR1.1-201ENST00000628177 80 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 Z97988.1-201ENST00000637697 135 ntBASIC-1.3□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 MIR136-201ENST00000385207 82 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 USP9YP28-201ENST00000435142 589 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 ZNF114P1-201ENST00000453500 292 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 RNU7-104P-201ENST00000459398 79 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 MTND5P34-201ENST00000568888 325 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 RNU6-545P-201ENST00000362681 104 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 SNORD38B-201ENST00000384690 67 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 AC016632.1-201ENST00000503994 196 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 RNU2-10P-201ENST00000516375 211 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 RNU7-28P-201ENST00000516759 62 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 VN1R87P-201ENST00000596706 487 ntBASIC-1.31□□□□□ -2.62
CHD7Q9P2D1 PIGPP3-201ENST00000425307 415 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 SNAP23P1-201ENST00000433229 246 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 RNU6-714P-201ENST00000516963 103 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 RNU7-161P-201ENST00000517289 62 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 BNIP3P40-201ENST00000596017 556 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AL122001.1-201ENST00000457027 370 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 RNU7-74P-201ENST00000459104 62 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC010587.1-201ENST00000505809 469 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 RNU7-128P-201ENST00000517247 62 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC009902.1-201ENST00000519351 183 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC011373.1-201ENST00000607270 237 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC068880.4-201ENST00000623082 495 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AL163152.1-201ENST00000642001 374 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 RNU6-54P-201ENST00000365563 107 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 MIR548A2-201ENST00000384956 97 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 MIR509-1-201ENST00000385265 94 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 MIR509-2-201ENST00000390724 91 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 RNU6-416P-201ENST00000516265 103 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 SNORA31.19-201ENST00000517079 126 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 MIR4753-201ENST00000585119 83 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AL138889.2-201ENST00000603883 242 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC104458.1-201ENST00000608243 463 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC011603.4-201ENST00000611325 277 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 AC099654.9-201ENST00000637055 678 ntBASIC-1.32□□□□□ -2.62
CHD7Q9P2D1 SNORD113-7-201ENST00000363762 77 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RNU6-746P-201ENST00000384112 109 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RNA5SP390-201ENST00000410191 113 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RPS27AP14-201ENST00000422868 454 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 AC074290.1-201ENST00000448883 135 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 AC015724.1-201ENST00000478577 156 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 MTND3P5-201ENST00000512798 333 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RNU7-99P-201ENST00000516271 62 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 AL049861.1-201ENST00000603130 150 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RN7SKP299-201ENST00000606679 301 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 SNORD115-34-201ENST00000362441 82 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RNU6-403P-201ENST00000363163 104 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RNU6-1078P-201ENST00000364522 103 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RNU6-720P-201ENST00000516363 108 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 AC025647.1-201ENST00000517879 253 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 MIR3923-201ENST00000579521 83 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 AC073648.5-201ENST00000603502 305 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 AC097460.3-201ENST00000623099 442 ntBASIC-1.33□□□□□ -2.62
CHD7Q9P2D1 RNY4P9-201ENST00000363194 97 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 SNORD115-16-201ENST00000363887 82 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 AC117470.1-201ENST00000381974 330 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 MT-TF-201ENST00000387314 71 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 MIR617-201ENST00000385030 97 ntBASIC-1.34□□□□□ -2.62
CHD7Q9P2D1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms