Protein–RNA interactions for Protein: Q9P2B4

CTTNBP2NL, CTTNBP2 N-terminal-like protein, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NLQ9P2B4 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU4-61P-201ENST00000411243 107 ntBASIC2.25□□□□□ -2.05
CTTNBP2NLQ9P2B4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CTTNBP2NLQ9P2B4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU6-774P-201ENST00000363238 107 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU4-84P-201ENST00000364200 139 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 RN7SKP101-201ENST00000411376 320 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 AL121914.1-201ENST00000450188 156 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 AL021397.1-201ENST00000451806 248 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC023449.1-201ENST00000454464 154 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU7-94P-201ENST00000459576 63 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC091178.2-201ENST00000584401 117 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC005786.1-201ENST00000588553 154 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC002984.1-201ENST00000591692 448 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 MIR6079-201ENST00000635807 62 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 U6.108-201ENST00000637764 58 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC018630.2-201ENST00000534866 2403 ntBASIC2.24□□□□□ -2.05
CTTNBP2NLQ9P2B4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNA5SP160-201ENST00000364866 120 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNY1P5-201ENST00000383890 115 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 Y_RNA.506-201ENST00000384494 102 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 MIR524-201ENST00000385242 87 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 Y_RNA.580-201ENST00000391004 95 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU4-53P-201ENST00000410828 140 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC025033.1-201ENST00000463883 194 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 RPS26P45-201ENST00000471748 340 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC107027.2-201ENST00000512197 115 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU6-341P-201ENST00000516973 96 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 MIR3133-201ENST00000583157 78 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 MIR6852-201ENST00000621699 66 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 MTND1P7-201ENST00000632801 297 ntBASIC2.23□□□□□ -2.05
CTTNBP2NLQ9P2B4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 Y_RNA.398-201ENST00000383952 99 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 MIR15B-201ENST00000385045 98 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU6-239P-201ENST00000390990 99 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 MIR1278-201ENST00000408753 81 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 AL392103.1-201ENST00000447000 198 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC233266.1-201ENST00000454518 96 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 RNU7-200P-201ENST00000516105 62 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 AL358944.1-201ENST00000528537 144 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 AL021707.8-201ENST00000609428 183 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC242852.1-201ENST00000612151 96 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 JPX_2.1-201ENST00000614161 69 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 AC244015.1-201ENST00000622301 99 ntBASIC2.22□□□□□ -2.05
CTTNBP2NLQ9P2B4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 SNORA33-201ENST00000363664 130 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU6-449P-201ENST00000383914 107 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 SNORD116-18-201ENST00000383961 92 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU6-125P-201ENST00000384505 107 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU2-40P-201ENST00000410833 196 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 BX510359.4-201ENST00000423750 193 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 AC099677.2-201ENST00000436385 175 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 AL163195.1-201ENST00000496941 348 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 RPL23AP91-201ENST00000569211 455 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 MIR6873-201ENST00000622788 63 ntBASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU11-3P-201ENST00000391111 133 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 SNORA79-201ENST00000408376 140 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 AC008413.1-201ENST00000511864 177 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 MTND5P41-201ENST00000517498 206 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 AL049861.1-201ENST00000603130 150 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.2□□□□□ -2.06
CTTNBP2NLQ9P2B4 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU6-643P-201ENST00000384018 107 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU4-43P-201ENST00000410628 137 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 RNU2-55P-201ENST00000411146 174 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 UBE2DNL-203ENST00000474922 222 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 AC069114.2-201ENST00000604699 304 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CTTNBP2NLQ9P2B4 Y_RNA.337-201ENST00000365312 102 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 359.5 ms