Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RNU6-647P-201ENST00000364243 107 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 SNORD56.5-201ENST00000364281 72 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 RNU6-1325P-201ENST00000364905 105 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 RNU6-1292P-201ENST00000383856 107 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 SNORD61-201ENST00000384252 73 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 RNU6-851P-201ENST00000384565 107 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 MIR184-201ENST00000384962 84 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 MIR891A-201ENST00000401237 79 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 RNA5SP247-201ENST00000411181 105 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 AL158823.1-201ENST00000418441 478 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 AC099677.2-201ENST00000436385 175 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 snoU13.23-201ENST00000458863 104 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 RNU6-772P-201ENST00000516042 105 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 RNU6-693P-201ENST00000516134 107 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 AC133485.4-201ENST00000561835 220 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 AC138907.4-201ENST00000570107 226 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 AC064859.1-201ENST00000624741 174 ntBASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXXC1Q9P0U4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 RNU6-1084P-201ENST00000362498 107 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 SNORD14E-201ENST00000364009 85 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 RNU6-442P-201ENST00000383968 104 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 SNORA1-201ENST00000384107 130 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 RNA5SP482-201ENST00000391269 118 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 AL035461.1-201ENST00000421490 332 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 Y_RNA.666-201ENST00000516187 112 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 RNU7-28P-201ENST00000516759 62 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 AC069114.2-201ENST00000604699 304 ntBASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CXXC1Q9P0U4 Y_RNA.265-201ENST00000364677 108 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 snoU2-30.1-201ENST00000365012 70 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 Y_RNA.525-201ENST00000384570 113 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 RNU6-1064P-201ENST00000410626 104 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 AF228730.3-201ENST00000436691 102 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 AL603825.1-201ENST00000438481 80 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 U6.95-201ENST00000636931 70 ntBASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CXXC1Q9P0U4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 U8.2-201ENST00000363156 134 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 U8.5-201ENST00000364528 136 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 Y_RNA.280-201ENST00000364765 112 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 RNU6-1061P-201ENST00000516530 99 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 RNU2-60P-201ENST00000517290 128 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 AC068657.1-201ENST00000520807 306 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 MIR4762-201ENST00000585261 75 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 AC007318.2-201ENST00000620999 243 ntBASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CXXC1Q9P0U4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 RNU6-476P-201ENST00000384726 107 ntBASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 AL022345.2-201ENST00000606307 135 ntBASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 MIR3914-2-201ENST00000637339 95 ntBASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 MIR7153-201ENST00000637758 57 ntBASIC3.18□□□□□ -1.9
CXXC1Q9P0U4 RNU1-148P-201ENST00000384472 162 ntBASIC3.17□□□□□ -1.9
CXXC1Q9P0U4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.17□□□□□ -1.9
CXXC1Q9P0U4 AC069257.2-201ENST00000441819 155 ntBASIC3.17□□□□□ -1.9
CXXC1Q9P0U4 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
CXXC1Q9P0U4 SNORD53-201ENST00000579969 78 ntBASIC3.17□□□□□ -1.9
CXXC1Q9P0U4 AC022202.1-201ENST00000613515 211 ntBASIC3.17□□□□□ -1.9
CXXC1Q9P0U4 FAM35CP-201ENST00000554755 2470 ntBASIC3.17□□□□□ -1.9
CXXC1Q9P0U4 AC009487.2-201ENST00000420969 6821 ntBASIC3.17□□□□□ -1.9
CXXC1Q9P0U4 PWAR6-201ENST00000552334 4618 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 AC096644.4-201ENST00000563417 2912 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 MIR30E-201ENST00000362104 92 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 RNU6-1019P-201ENST00000364424 107 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 RNU6-309P-201ENST00000364573 106 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 RNU6-44P-201ENST00000384045 107 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 RNA5SP137-201ENST00000516833 135 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 AC107016.2-201ENST00000547968 190 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 SNORA28-201ENST00000606769 126 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
CXXC1Q9P0U4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms