Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.45□□□□□ -2.18
SPHK1Q9NYA1 PGBD4P5-201ENST00000445958 426 ntBASIC1.45□□□□□ -2.18
SPHK1Q9NYA1 AL049830.1-201ENST00000468034 425 ntBASIC1.45□□□□□ -2.18
SPHK1Q9NYA1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.45□□□□□ -2.18
SPHK1Q9NYA1 AC011604.1-201ENST00000545978 196 ntBASIC1.45□□□□□ -2.18
SPHK1Q9NYA1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 MIR378A-201ENST00000362177 66 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 RNU4-41P-201ENST00000364426 143 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 SNORA63C-201ENST00000364578 129 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 Y_RNA.569-201ENST00000384749 103 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 MIR194-1-201ENST00000384892 85 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 HMGN1P10-201ENST00000474557 553 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 AC117454.1-201ENST00000491120 168 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 RNU6-635P-201ENST00000516651 102 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 Y_RNA.720-201ENST00000517166 92 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 AC005972.2-201ENST00000604690 348 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 AL512598.1-201ENST00000610158 273 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 AC106754.2-201ENST00000623006 233 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 SNORD3E-202ENST00000627253 216 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 AC134026.1-201ENST00000623249 2239 ntBASIC1.44□□□□□ -2.18
SPHK1Q9NYA1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 SNORD68-201ENST00000363214 84 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 Y_RNA.276-201ENST00000364732 109 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 RNU6-290P-201ENST00000365212 101 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 Y_RNA.422-201ENST00000384054 114 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 U8.16-201ENST00000391279 133 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 RNU2-14P-201ENST00000411053 191 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 BTF3P4-201ENST00000418852 495 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 MTCO1P5-201ENST00000433573 344 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 OR9P1P-201ENST00000496431 281 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 RNU6-191P-201ENST00000516295 94 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 RNA5SP168-201ENST00000516642 112 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 MIR4422-201ENST00000581938 83 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 AC008737.2-201ENST00000599446 118 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 AC073349.3-201ENST00000617616 186 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SPHK1Q9NYA1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 MIR562-201ENST00000384894 95 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 AL731563.1-201ENST00000442202 214 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 AC093850.1-201ENST00000454121 251 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 AL442663.2-201ENST00000554385 511 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 AC015688.6-201ENST00000577737 104 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 AL360085.1-201ENST00000604713 532 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 SNORA28-201ENST00000606769 126 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 AL365434.2-201ENST00000607979 234 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 AL591926.4-201ENST00000616895 298 ntBASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SPHK1Q9NYA1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 Y_RNA.84-201ENST00000363011 104 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 U8.7-201ENST00000364940 136 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 MLLT10P1-201ENST00000418346 262 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 Z98949.2-201ENST00000440996 144 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 RPL23AP54-201ENST00000495129 419 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 AC024405.2-202ENST00000532731 184 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 POLR3GP1-201ENST00000594073 261 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 AC007742.2-201ENST00000618226 398 ntBASIC1.41□□□□□ -2.18
SPHK1Q9NYA1 MIR302D-201ENST00000362275 68 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 SNORA25.1-201ENST00000362326 128 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 SNORD1A-201ENST00000364968 72 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 SNORA72-201ENST00000384339 132 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 RNU6-424P-201ENST00000384367 105 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 RNU6-713P-201ENST00000384761 107 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 MIR660-201ENST00000385235 97 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 RNU6-1109P-201ENST00000391187 107 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 SNORA26.5-201ENST00000391215 123 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 MTCO2P33-201ENST00000402100 465 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 PIGPP3-201ENST00000425307 415 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 AC104332.1-201ENST00000440471 797 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 SCARNA15.1-201ENST00000516384 125 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 AC008269.2-201ENST00000561915 1105 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 MIR3937-201ENST00000580135 106 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 AP001485.1-201ENST00000604799 199 ntBASIC1.4□□□□□ -2.19
SPHK1Q9NYA1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.39□□□□□ -2.19
SPHK1Q9NYA1 RNU6-801P-201ENST00000364087 105 ntBASIC1.39□□□□□ -2.19
SPHK1Q9NYA1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms