Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ATG3Q9NT62 RNU6-766P-201ENST00000362478 107 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 Y_RNA.85-201ENST00000363014 111 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 RNU6-271P-201ENST00000363858 105 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 SNORD114-30-201ENST00000364448 72 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 MIR592-201ENST00000384959 97 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 MIR1283-1-201ENST00000408494 87 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 RNU2-32P-201ENST00000411193 191 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 CALM2P4-201ENST00000430810 426 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.32□□□□□ -1.88
ATG3Q9NT62 AC245102.2-201ENST00000448956 180 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 AL021397.1-201ENST00000451806 248 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 AC080013.2-201ENST00000460866 323 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 UBL5P3-201ENST00000475112 231 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 RNU5F-4P-201ENST00000516581 114 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 AC007012.1-201ENST00000567192 175 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 AC103810.1-201ENST00000579873 453 ntBASIC3.32□□□□□ -1.88
ATG3Q9NT62 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ATG3Q9NT62 RNU6-756P-201ENST00000383997 107 ntBASIC3.31□□□□□ -1.88
ATG3Q9NT62 Y_RNA.528-201ENST00000384575 108 ntBASIC3.31□□□□□ -1.88
ATG3Q9NT62 MIR624-201ENST00000385217 97 ntBASIC3.31□□□□□ -1.88
ATG3Q9NT62 Z98742.2-201ENST00000431564 187 ntBASIC3.31□□□□□ -1.88
ATG3Q9NT62 UBBP3-201ENST00000445497 241 ntBASIC3.31□□□□□ -1.88
ATG3Q9NT62 RNU6-221P-201ENST00000459541 99 ntBASIC3.31□□□□□ -1.88
ATG3Q9NT62 RNA5SP236-201ENST00000516169 116 ntBASIC3.31□□□□□ -1.88
ATG3Q9NT62 AC105245.1-201ENST00000581934 244 ntBASIC3.31□□□□□ -1.88
ATG3Q9NT62 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATG3Q9NT62 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ATG3Q9NT62 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ATG3Q9NT62 Y_RNA.66-201ENST00000362862 102 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 RNU6-1209P-201ENST00000363655 107 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 Y_RNA.203-201ENST00000364106 102 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 RNU6-461P-201ENST00000364195 107 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 Y_RNA.796-201ENST00000364268 102 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 Y_RNA.799-201ENST00000364992 102 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 Y_RNA.486-201ENST00000384398 107 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 MIR627-201ENST00000384979 97 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 SNORD12C-201ENST00000386307 89 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 RNU6-57P-201ENST00000411348 103 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 SNORA18.4-201ENST00000516440 124 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 RNU1-104P-201ENST00000517280 175 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 AC079598.5-201ENST00000547460 117 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.3□□□□□ -1.88
ATG3Q9NT62 MIR4765-201ENST00000585007 77 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 RPL17P51-201ENST00000605218 238 ntBASIC3.3□□□□□ -1.88
ATG3Q9NT62 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.3□□□□□ -1.88
ATG3Q9NT62 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.3□□□□□ -1.88
ATG3Q9NT62 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG3Q9NT62 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATG3Q9NT62 Y_RNA.163-201ENST00000363702 113 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 RNA5SP125-201ENST00000364843 120 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 MIR488-201ENST00000365739 83 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 SNORA1-201ENST00000384107 130 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 MIR504-201ENST00000385065 83 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATG3Q9NT62 RNA5SP127-201ENST00000411051 133 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 RNU7-14P-201ENST00000459331 62 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 RNU6-412P-201ENST00000516434 106 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 RNU7-149P-201ENST00000516739 59 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 AL365205.2-201ENST00000594586 68 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 Pinc.1-201ENST00000616452 154 ntBASIC3.29□□□□□ -1.88
ATG3Q9NT62 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.29□□□□□ -1.88
ATG3Q9NT62 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATG3Q9NT62 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG3Q9NT62 RNU4-13P-201ENST00000364019 141 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 RNU6-975P-201ENST00000384296 105 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 MIR562-201ENST00000384894 95 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 FO393413.1-201ENST00000402892 195 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG3Q9NT62 AC016909.1-201ENST00000415916 166 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 AC104332.2-201ENST00000429959 156 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 AF228730.3-201ENST00000436691 102 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 RPL36AP48-201ENST00000485521 314 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 ATP5EP1-201ENST00000510257 156 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 RNU6-365P-201ENST00000517113 106 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG3Q9NT62 MIR3117-201ENST00000584034 78 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG3Q9NT62 AL035470.1-201ENST00000622571 220 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 AC080128.1-201ENST00000474389 1917 ntBASIC3.28□□□□□ -1.88
ATG3Q9NT62 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG3Q9NT62 AC093010.3-201ENST00000570269 15214 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG3Q9NT62 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
ATG3Q9NT62 SNORA51.5-201ENST00000384126 131 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 RN7SKP223-201ENST00000410582 62 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.27□□□□□ -1.89
ATG3Q9NT62 MICF-203ENST00000432679 129 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 RPS4XP11-201ENST00000446897 772 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 RN7SL636P-201ENST00000497504 294 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ATG3Q9NT62 MIR3129-201ENST00000581095 76 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 AC062037.1-201ENST00000605302 128 ntBASIC3.27□□□□□ -1.89
ATG3Q9NT62 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ATG3Q9NT62 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.27□□□□□ -1.89
ATG3Q9NT62 MIR300-201ENST00000401138 83 ntBASIC3.26□□□□□ -1.89
ATG3Q9NT62 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.26□□□□□ -1.89
ATG3Q9NT62 RN7SKP192-201ENST00000411291 327 ntBASIC3.26□□□□□ -1.89
ATG3Q9NT62 AC025647.1-201ENST00000517879 253 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms