Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC245060.5-201ENST00000610778 3293 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 RNU6-653P-201ENST00000363074 106 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 SNORA33-201ENST00000363664 130 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 Y_RNA.297-201ENST00000364950 91 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 Y_RNA.435-201ENST00000384095 112 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 RNU6-136P-201ENST00000384663 107 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 MIR626-201ENST00000385032 94 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 RNA5SP212-201ENST00000391223 107 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 AC245047.4-201ENST00000433189 144 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.37□□□□□ -2.03
VTA1Q9NP79 RNU6-138P-201ENST00000515952 107 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 RNU6-182P-201ENST00000516970 105 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 Y_RNA.714-201ENST00000517065 90 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.37□□□□□ -2.03
VTA1Q9NP79 SNORA28-201ENST00000606769 126 ntBASIC2.37□□□□□ -2.03
VTA1Q9NP79 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VTA1Q9NP79 Y_RNA.242-201ENST00000364473 110 ntBASIC2.36□□□□□ -2.03
VTA1Q9NP79 RNU4-17P-201ENST00000365598 141 ntBASIC2.36□□□□□ -2.03
VTA1Q9NP79 U8.13-201ENST00000390842 128 ntBASIC2.36□□□□□ -2.03
VTA1Q9NP79 RNU2-2P-201ENST00000410396 191 ntBASIC2.36□□□□□ -2.03
VTA1Q9NP79 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VTA1Q9NP79 AL158823.1-201ENST00000418441 478 ntBASIC2.36□□□□□ -2.03
VTA1Q9NP79 RNVU1-2-201ENST00000516326 135 ntBASIC2.36□□□□□ -2.03
VTA1Q9NP79 Y_RNA.121-201ENST00000363309 113 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 RNU6-103P-201ENST00000363686 107 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 RNA5SP482-201ENST00000391269 118 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 AC245047.3-201ENST00000429428 127 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 HMGN2P23-201ENST00000456759 269 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 Y_RNA.644-201ENST00000459006 113 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 HMGB3P3-201ENST00000510526 400 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 RN7SKP164-201ENST00000516138 266 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 Y_RNA.674-201ENST00000516362 113 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 RNU2-56P-201ENST00000516826 190 ntBASIC2.35□□□□□ -2.03
VTA1Q9NP79 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VTA1Q9NP79 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VTA1Q9NP79 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.35□□□□□ -2.03
VTA1Q9NP79 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VTA1Q9NP79 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VTA1Q9NP79 RNU6-112P-201ENST00000363599 104 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 RNU6-1020P-201ENST00000363684 107 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 Y_RNA.203-201ENST00000364106 102 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 RNY3P5-201ENST00000384127 102 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 SNORA26.9-201ENST00000391322 122 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 RN7SKP200-201ENST00000410564 320 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 AC023449.1-201ENST00000454464 154 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 AC233266.1-201ENST00000454518 96 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 AL049830.1-201ENST00000468034 425 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 RNU6-295P-201ENST00000516901 104 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 RNU6-548P-201ENST00000517083 115 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 SNORA81.3-201ENST00000517283 198 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.34□□□□□ -2.03
VTA1Q9NP79 AC022217.4-201ENST00000604389 163 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 MIR6840-201ENST00000611937 71 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 AC242852.1-201ENST00000612151 96 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 AC244015.1-201ENST00000622301 99 ntBASIC2.34□□□□□ -2.03
VTA1Q9NP79 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VTA1Q9NP79 Y_RNA.267-201ENST00000364679 109 ntBASIC2.33□□□□□ -2.04
VTA1Q9NP79 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
VTA1Q9NP79 Y_RNA.793-201ENST00000411222 111 ntBASIC2.33□□□□□ -2.04
VTA1Q9NP79 RNU2-64P-201ENST00000411315 191 ntBASIC2.33□□□□□ -2.04
VTA1Q9NP79 RPS27P1-201ENST00000450552 247 ntBASIC2.33□□□□□ -2.04
VTA1Q9NP79 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.33□□□□□ -2.04
VTA1Q9NP79 CBX3P4-201ENST00000538909 354 ntBASIC2.33□□□□□ -2.04
VTA1Q9NP79 AC087685.1-201ENST00000587507 141 ntBASIC2.33□□□□□ -2.04
VTA1Q9NP79 AC072026.1-201ENST00000605023 201 ntBASIC2.33□□□□□ -2.04
VTA1Q9NP79 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VTA1Q9NP79 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.32□□□□□ -2.04
VTA1Q9NP79 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VTA1Q9NP79 RNA5SP99-201ENST00000364020 114 ntBASIC2.32□□□□□ -2.04
VTA1Q9NP79 Y_RNA.274-201ENST00000364714 101 ntBASIC2.32□□□□□ -2.04
VTA1Q9NP79 Y_RNA.621-201ENST00000411065 96 ntBASIC2.32□□□□□ -2.04
VTA1Q9NP79 FTH1P12-201ENST00000432137 551 ntBASIC2.32□□□□□ -2.04
VTA1Q9NP79 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.32□□□□□ -2.04
VTA1Q9NP79 RNU6-126P-201ENST00000516685 103 ntBASIC2.32□□□□□ -2.04
VTA1Q9NP79 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.32□□□□□ -2.04
VTA1Q9NP79 AL391903.3-201ENST00000612158 163 ntBASIC2.32□□□□□ -2.04
VTA1Q9NP79 JPX_2.1-201ENST00000614161 69 ntBASIC2.32□□□□□ -2.04
VTA1Q9NP79 MIR8054-201ENST00000620877 86 ntBASIC2.32□□□□□ -2.04
VTA1Q9NP79 Y_RNA.7-201ENST00000362352 102 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 RNU6-969P-201ENST00000383900 105 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 RNU6-296P-201ENST00000384608 107 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 MIR616-201ENST00000385293 97 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 AC019129.1-201ENST00000403786 261 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 RNA5SP100-201ENST00000410903 110 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 RNA5SP59-201ENST00000410922 110 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 RPL30P13-201ENST00000418873 348 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 HMGN1P7-201ENST00000491722 313 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 RNU6-1291P-201ENST00000516591 104 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 AL353997.5-201ENST00000618886 171 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.31□□□□□ -2.04
VTA1Q9NP79 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VTA1Q9NP79 RNU4-41P-201ENST00000364426 143 ntBASIC2.3□□□□□ -2.04
VTA1Q9NP79 Y_RNA.308-201ENST00000365043 101 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms