Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-41P-201ENST00000384741 107 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 RNA5SP323-201ENST00000391094 133 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 CST2P1-201ENST00000425770 87 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 RNU6-240P-201ENST00000516098 97 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 Y_RNA.694-201ENST00000516677 117 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 AC024995.1-201ENST00000523014 93 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.84□□□□□ -1.95
SSU72Q9NP77 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.84□□□□□ -1.95
SSU72Q9NP77 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.84□□□□□ -1.95
SSU72Q9NP77 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.84□□□□□ -1.95
SSU72Q9NP77 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 MIR3651-201ENST00000630427 90 ntBASIC2.84□□□□□ -1.95
SSU72Q9NP77 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SSU72Q9NP77 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSU72Q9NP77 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SSU72Q9NP77 SNORA63.1-201ENST00000362493 131 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 SNORD68-201ENST00000363214 84 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 RNU6-160P-201ENST00000384591 107 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 Y_RNA.547-201ENST00000384654 119 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 SNORD12C-201ENST00000386307 89 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 MT-TI-201ENST00000387365 69 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.83□□□□□ -1.96
SSU72Q9NP77 AC091153.1-201ENST00000466297 402 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 COX6CP6-201ENST00000490840 228 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.83□□□□□ -1.96
SSU72Q9NP77 AC004486.1-201ENST00000546846 233 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.83□□□□□ -1.96
SSU72Q9NP77 MIR1254-2-201ENST00000579553 63 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 MIR3670-2-201ENST00000582974 65 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 MIR3670-1-201ENST00000584160 65 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 MIR3670-3-201ENST00000584855 65 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 MIR3670-4-201ENST00000612260 65 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 AC134878.1-201ENST00000619901 243 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 AL035470.1-201ENST00000622571 220 ntBASIC2.83□□□□□ -1.96
SSU72Q9NP77 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SSU72Q9NP77 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SSU72Q9NP77 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.82□□□□□ -1.96
SSU72Q9NP77 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSU72Q9NP77 RNU6-349P-201ENST00000362402 107 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 Y_RNA.410-201ENST00000383992 113 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 SNORA48.7-201ENST00000391302 135 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 SNORA11-201ENST00000408789 128 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 RNU7-94P-201ENST00000459576 63 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 RPS29P24-201ENST00000486345 171 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.82□□□□□ -1.96
SSU72Q9NP77 Y_RNA.714-201ENST00000517065 90 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.82□□□□□ -1.96
SSU72Q9NP77 AC002984.1-201ENST00000591692 448 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 AC009831.4-201ENST00000620744 325 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 CTSLP2-204ENST00000629029 392 ntBASIC2.82□□□□□ -1.96
SSU72Q9NP77 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SSU72Q9NP77 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.82□□□□□ -1.96
SSU72Q9NP77 Y_RNA.37-201ENST00000362606 108 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 Y_RNA.242-201ENST00000364473 110 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 RNU6-905P-201ENST00000384434 107 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 RNU6-851P-201ENST00000384565 107 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 MIR515-2-201ENST00000384883 83 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 MIR515-1-201ENST00000384884 83 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 AL049873.1-201ENST00000480540 376 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 SCARNA13-201ENST00000516672 275 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 SNORD36C-201ENST00000516733 66 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 MIR5680-201ENST00000577577 84 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 MIR3616-201ENST00000584070 92 ntBASIC2.81□□□□□ -1.96
SSU72Q9NP77 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SSU72Q9NP77 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SSU72Q9NP77 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.8□□□□□ -1.96
SSU72Q9NP77 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SSU72Q9NP77 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.8□□□□□ -1.96
SSU72Q9NP77 SNORA2.2-201ENST00000365473 135 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 RNU6-1189P-201ENST00000383958 107 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 MIR200C-201ENST00000384980 68 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 AC104332.2-201ENST00000429959 156 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.8□□□□□ -1.96
SSU72Q9NP77 AC009238.1-201ENST00000442165 424 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 AC009237.6-201ENST00000446969 424 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 snoU13.22-201ENST00000459428 104 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.8□□□□□ -1.96
SSU72Q9NP77 RNU6-412P-201ENST00000516434 106 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 SNORD45.4-201ENST00000516629 73 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 AC023632.4-201ENST00000517783 191 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 AC074050.1-201ENST00000563247 211 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 AC006254.2-201ENST00000603259 279 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.8□□□□□ -1.96
SSU72Q9NP77 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSU72Q9NP77 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
SSU72Q9NP77 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSU72Q9NP77 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
SSU72Q9NP77 SNORD115-28-201ENST00000363931 81 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 SNORA25.6-201ENST00000364121 118 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 Y_RNA.328-201ENST00000365208 113 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 Y_RNA.348-201ENST00000365403 103 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 RNU6-442P-201ENST00000383968 104 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 MIR23B-201ENST00000384832 97 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 MIR134-201ENST00000385258 73 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 RN7SKP284-201ENST00000411002 343 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.79□□□□□ -1.96
SSU72Q9NP77 Y_RNA.677-201ENST00000516401 85 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 RNU1-45P-201ENST00000517191 141 ntBASIC2.79□□□□□ -1.96
SSU72Q9NP77 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms