Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 uc_338.25-201ENST00000613756 156 ntBASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NUCKS1Q9H1E3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.267-201ENST00000364679 109 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR522-201ENST00000385071 87 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 RNU7-25P-201ENST00000516544 62 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.714-201ENST00000517065 90 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR2682-201ENST00000580305 110 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR4305-201ENST00000583252 102 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 AL359075.3-201ENST00000613288 217 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR7112-201ENST00000616126 65 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 AC006111.3-201ENST00000622137 383 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 MIR6079-201ENST00000635807 62 ntBASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUCKS1Q9H1E3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.37-201ENST00000362606 108 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNU1-105P-201ENST00000363470 161 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNY1P1-201ENST00000364372 112 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNU1-133P-201ENST00000364867 167 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 FTH1P12-201ENST00000432137 551 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNU7-61P-201ENST00000515897 61 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-341P-201ENST00000516973 96 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 AC091544.4-201ENST00000555268 342 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 MAPK10-322ENST00000641485 4530 ntBASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.42□□□□□ -1.86
NUCKS1Q9H1E3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC080128.1-201ENST00000474389 1917 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 MIR340-201ENST00000362125 95 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-1099P-201ENST00000363533 107 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 SNORA33-201ENST00000363664 130 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-743P-201ENST00000364151 106 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 MIR802-201ENST00000390235 94 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU11-5P-201ENST00000391216 129 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 Y_RNA.601-201ENST00000410500 113 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC123900.1-201ENST00000420390 96 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC009414.1-201ENST00000427200 443 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RPL39P39-201ENST00000455840 151 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU1-131P-201ENST00000458943 161 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RN7SL75P-201ENST00000461926 281 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC093259.1-201ENST00000509755 300 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU2-13P-201ENST00000515909 113 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU6-65P-201ENST00000516332 98 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 RNU2-35P-201ENST00000516446 142 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 SNORD36C-201ENST00000516733 66 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AL358944.1-201ENST00000528537 144 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC006441.5-201ENST00000612680 209 ntBASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.41□□□□□ -1.86
NUCKS1Q9H1E3 AC093831.2-201ENST00000624393 3427 ntBASIC3.4□□□□□ -1.86
NUCKS1Q9H1E3 snoU2-30.2-201ENST00000362805 70 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 SNORD115-28-201ENST00000363931 81 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.332-201ENST00000365271 113 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 RNU6-546P-201ENST00000383991 107 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.440-201ENST00000384120 114 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 RNA5SP274-201ENST00000410484 108 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 RNU7-6P-201ENST00000516845 62 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 AC022254.1-201ENST00000567857 235 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 AL161756.2-201ENST00000604597 246 ntBASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.4□□□□□ -1.87
NUCKS1Q9H1E3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.73-201ENST00000362910 113 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.221-201ENST00000364248 96 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 Y_RNA.547-201ENST00000384654 119 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 SNORA11.1-201ENST00000408133 129 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 AC113410.1-201ENST00000505029 247 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 MIR3683-201ENST00000580847 82 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 IGLL4P-201ENST00000614590 133 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 MIR3651-201ENST00000630427 90 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 AC073346.2-201ENST00000624724 2058 ntBASIC3.39□□□□□ -1.87
NUCKS1Q9H1E3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 269.1 ms