Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.19-201ENST00000362462 99 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-117P-201ENST00000365415 107 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-1062P-201ENST00000383908 107 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 MIR764-201ENST00000390811 85 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 PCNPP3-201ENST00000393579 471 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 AL390729.2-201ENST00000416137 156 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 HSPE1P13-201ENST00000451143 297 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-138P-201ENST00000515952 107 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-63P-201ENST00000516690 95 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 RNU7-28P-201ENST00000516759 62 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.713-201ENST00000517013 96 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 SUMO2P16-201ENST00000519475 264 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 AC015712.3-201ENST00000559380 164 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 AL390123.1-201ENST00000603216 237 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 AP001485.1-201ENST00000604799 199 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 AC022441.3-201ENST00000605737 136 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 AC073349.3-201ENST00000617616 186 ntBASIC1.83□□□□□ -2.12
HERPUD2Q9BSE4 MIR302D-201ENST00000362275 68 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.20-201ENST00000362479 113 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.84-201ENST00000363011 104 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 RNU4-50P-201ENST00000364361 141 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.288-201ENST00000364854 92 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.424-201ENST00000384063 103 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-209P-201ENST00000384118 107 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.462-201ENST00000384268 102 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-1203P-201ENST00000410703 110 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-237P-201ENST00000515985 71 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-406P-201ENST00000516470 107 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-570P-201ENST00000517051 105 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 AP003733.2-201ENST00000529409 171 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 AL121890.5-201ENST00000620848 304 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 AL513423.1-201ENST00000621695 132 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 SNORD3E-202ENST00000627253 216 ntBASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HERPUD2Q9BSE4 AL157777.2-201ENST00000258070 137 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.16-201ENST00000362421 102 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 RNU4-13P-201ENST00000364019 141 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.274-201ENST00000364714 101 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.439-201ENST00000384119 94 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.489-201ENST00000384410 101 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 RNU4-70P-201ENST00000384579 139 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 SNORD115-46-201ENST00000390982 71 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 RPL23AP36-201ENST00000413895 458 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 SNX2P2-201ENST00000424553 323 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 AC005042.3-201ENST00000453230 174 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-970P-201ENST00000516312 107 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 AC130289.1-201ENST00000577321 73 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 AC009779.6-201ENST00000603972 165 ntBASIC1.81□□□□□ -2.12
HERPUD2Q9BSE4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.183-201ENST00000363882 113 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 RNY1-201ENST00000364228 113 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.237-201ENST00000364439 102 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-200P-201ENST00000364743 107 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.552-201ENST00000384665 112 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 MIR1302-6-201ENST00000408466 90 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 RNA5SP511-201ENST00000410487 115 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 AC027119.1-201ENST00000440877 241 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 AL049830.1-201ENST00000468034 425 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-902P-201ENST00000517212 91 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 MIR4769-201ENST00000584126 77 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 FTX_2.1-201ENST00000618816 94 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 U2.22-201ENST00000636441 106 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
HERPUD2Q9BSE4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 SNORA1B-201ENST00000362535 133 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-102P-201ENST00000384485 104 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.541-201ENST00000384640 113 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-482P-201ENST00000391068 107 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 RNA5SP482-201ENST00000391269 118 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 RPL39P38-201ENST00000467018 153 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 RNU6-436P-201ENST00000516171 114 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HERPUD2Q9BSE4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 SNORA20.1-201ENST00000364790 130 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.331-201ENST00000365267 102 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.416-201ENST00000384014 113 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 Y_RNA.785-201ENST00000384290 109 ntBASIC1.78□□□□□ -2.12
HERPUD2Q9BSE4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 344 ms