Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC010598.1-201ENST00000510378 103 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 RNU6-113P-201ENST00000516653 101 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 AL050343.2-201ENST00000607338 280 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 AC091895.1-201ENST00000624494 256 ntBASIC0.95□□□□□ -2.26
SCN2AQ99250 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.95□□□□□ -2.26
SCN2AQ99250 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
SCN2AQ99250 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 RNA5SP259-201ENST00000365541 109 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 SNORA22B-201ENST00000383876 138 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 SNORA53-201ENST00000391141 249 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 RNU6-130P-201ENST00000411112 103 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AL354751.2-201ENST00000415471 210 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AC245047.7-201ENST00000440265 293 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 MTND4LP30-201ENST00000454092 297 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 Y_RNA.639-201ENST00000458981 102 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 RN7SKP88-201ENST00000516847 250 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 RNU6-902P-201ENST00000517212 91 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AC090049.2-201ENST00000550377 109 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AC092447.9-201ENST00000603395 144 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 C8orf59P2-201ENST00000603441 271 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 7SK.8-201ENST00000612110 250 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 7SK.11-201ENST00000615477 250 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AC010205.1-201ENST00000616668 449 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 7SK.13-201ENST00000622040 250 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AC127459.3-201ENST00000624328 466 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 Y_RNA.61-201ENST00000362835 102 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 RNU6-626P-201ENST00000363354 107 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 RNU4-50P-201ENST00000364361 141 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 PIGPP3-201ENST00000425307 415 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AC096644.2-201ENST00000429278 159 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 MRPS10P1-201ENST00000448483 130 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 LINC01399-202ENST00000458450 244 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SCN2AQ99250 AC093027.1-201ENST00000546698 429 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.94□□□□□ -2.26
SCN2AQ99250 AL080274.1-201ENST00000605565 220 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 JPX_2.1-201ENST00000614161 69 ntBASIC0.94□□□□□ -2.26
SCN2AQ99250 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SCN2AQ99250 RNU4-90P-201ENST00000362773 141 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 Y_RNA.143-201ENST00000363520 106 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 RNU6-801P-201ENST00000364087 105 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 RNU6-879P-201ENST00000364328 108 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 Y_RNA.424-201ENST00000384063 103 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 Y_RNA.431-201ENST00000384086 102 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 RNU6-20P-201ENST00000384106 107 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 SNORD38C-201ENST00000384381 69 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 Y_RNA.535-201ENST00000384612 99 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 RNA5SP109-201ENST00000391010 116 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 RNU2-61P-201ENST00000411069 191 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.93□□□□□ -2.26
SCN2AQ99250 POLR2J4-204ENST00000418424 324 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 AL162725.1-201ENST00000435405 301 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 RPL39P39-201ENST00000455840 151 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 OR2A41P-201ENST00000473586 105 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 Y_RNA.714-201ENST00000517065 90 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.93□□□□□ -2.26
SCN2AQ99250 Y_RNA.44-201ENST00000362676 108 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 SNORD14.1-201ENST00000365609 90 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 Y_RNA.579-201ENST00000390939 94 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 MTND4LP11-201ENST00000422184 280 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 snoU13.9-201ENST00000458927 103 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 RNU6-976P-201ENST00000516086 111 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 RNU6-966P-201ENST00000516479 104 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 Y_RNA.702-201ENST00000516843 96 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 AL442663.2-201ENST00000554385 511 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 MIR4659A-201ENST00000580269 81 ntBASIC0.93□□□□□ -2.26
SCN2AQ99250 AC245060.5-201ENST00000610778 3293 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 Y_RNA.230-201ENST00000364348 109 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 snoU2-30.1-201ENST00000365012 70 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 Y_RNA.310-201ENST00000365063 113 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN2AQ99250 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.92□□□□□ -2.26
SCN2AQ99250 RPS20P10-201ENST00000451209 253 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 AC099513.1-201ENST00000490423 301 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 RNA5SP168-201ENST00000516642 112 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 AP003357.1-201ENST00000604497 148 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 AC011476.5-201ENST00000615594 130 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 AC007485.1-201ENST00000616755 206 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 MIR8063-201ENST00000621930 81 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 SNORD3E-202ENST00000627253 216 ntBASIC0.92□□□□□ -2.26
SCN2AQ99250 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SCN2AQ99250 Y_RNA.31-201ENST00000362574 102 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 RNU6-442P-201ENST00000383968 104 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 RNU6-439P-201ENST00000384188 106 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 Y_RNA.462-201ENST00000384268 102 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 SNORA72-201ENST00000384339 132 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 RNU6-910P-201ENST00000390844 107 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 RNU6-131P-201ENST00000391144 107 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.91□□□□□ -2.26
SCN2AQ99250 SNX2P2-201ENST00000424553 323 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 AC015922.2-201ENST00000435593 184 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 AC027119.1-201ENST00000440877 241 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 RPL23AP54-201ENST00000495129 419 ntBASIC0.91□□□□□ -2.26
SCN2AQ99250 AC011373.1-201ENST00000607270 237 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms