Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.54□□□□□ -1.84
TRERF1Q96PN7 DEFB131E-201ENST00000532329 154 ntBASIC3.54□□□□□ -1.84
TRERF1Q96PN7 MIR4474-201ENST00000579189 78 ntBASIC3.54□□□□□ -1.84
TRERF1Q96PN7 AC073413.2-201ENST00000604332 360 ntBASIC3.54□□□□□ -1.84
TRERF1Q96PN7 AL033523.1-201ENST00000605153 153 ntBASIC3.54□□□□□ -1.84
TRERF1Q96PN7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRERF1Q96PN7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRERF1Q96PN7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TRERF1Q96PN7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRERF1Q96PN7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRERF1Q96PN7 AC009487.4-201ENST00000624969 3585 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNY1P1-201ENST00000364372 112 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 SNORA2.2-201ENST00000365473 135 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU6-816P-201ENST00000390914 107 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU1-101P-201ENST00000391171 127 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU6-1268P-201ENST00000391214 107 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU6-1239P-201ENST00000391310 107 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 AC009238.1-201ENST00000442165 424 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 AC025750.2-201ENST00000442609 450 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 AC009237.6-201ENST00000446969 424 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU7-164P-201ENST00000459221 62 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU7-61P-201ENST00000515897 61 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU6-162P-201ENST00000516228 103 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU1-143P-201ENST00000516296 146 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.53□□□□□ -1.84
TRERF1Q96PN7 U1.23-201ENST00000610293 146 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 RNU1-68P-201ENST00000615382 146 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 U1.39-201ENST00000621562 146 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TRERF1Q96PN7 AL035425.3-201ENST00000564206 4996 ntBASIC3.53□□□□□ -1.84
TRERF1Q96PN7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.52□□□□□ -1.85
TRERF1Q96PN7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRERF1Q96PN7 RNU1-72P-201ENST00000362976 153 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 RNU1-105P-201ENST00000363470 161 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 MIR218-1-201ENST00000384999 110 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRERF1Q96PN7 U8.17-201ENST00000391292 132 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 AC107083.1-201ENST00000439643 279 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 AC233266.1-201ENST00000454518 96 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 RNU6-1291P-201ENST00000516591 104 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 AC004486.1-201ENST00000546846 233 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 AC103810.1-201ENST00000579873 453 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 AC022217.4-201ENST00000604389 163 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 AC242852.1-201ENST00000612151 96 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 AC244015.1-201ENST00000622301 99 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.52□□□□□ -1.85
TRERF1Q96PN7 MAPK10-322ENST00000641485 4530 ntBASIC3.52□□□□□ -1.85
TRERF1Q96PN7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRERF1Q96PN7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRERF1Q96PN7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
TRERF1Q96PN7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.51□□□□□ -1.85
TRERF1Q96PN7 RNU6-1276P-201ENST00000365372 104 ntBASIC3.51□□□□□ -1.85
TRERF1Q96PN7 AC022018.1-201ENST00000430685 241 ntBASIC3.51□□□□□ -1.85
TRERF1Q96PN7 RNA5SP367-201ENST00000516557 118 ntBASIC3.51□□□□□ -1.85
TRERF1Q96PN7 RNU6-965P-201ENST00000516721 96 ntBASIC3.51□□□□□ -1.85
TRERF1Q96PN7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRERF1Q96PN7 IGLL4P-201ENST00000614590 133 ntBASIC3.51□□□□□ -1.85
TRERF1Q96PN7 MIR6852-201ENST00000621699 66 ntBASIC3.51□□□□□ -1.85
TRERF1Q96PN7 MIR1248-201ENST00000629190 106 ntBASIC3.51□□□□□ -1.85
TRERF1Q96PN7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TRERF1Q96PN7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.51□□□□□ -1.85
TRERF1Q96PN7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRERF1Q96PN7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRERF1Q96PN7 SNORA33-201ENST00000363664 130 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 RNU4-36P-201ENST00000364294 144 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 RNU6-438P-201ENST00000365561 103 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 MIR520G-201ENST00000385064 90 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 MIR591-201ENST00000385290 95 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 RNU6-644P-201ENST00000391155 98 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.5□□□□□ -1.85
TRERF1Q96PN7 MIR548Z-201ENST00000584743 97 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.5□□□□□ -1.85
TRERF1Q96PN7 MIR7106-201ENST00000612419 65 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 AC073476.4-201ENST00000628409 72 ntBASIC3.5□□□□□ -1.85
TRERF1Q96PN7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.49□□□□□ -1.85
TRERF1Q96PN7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.49□□□□□ -1.85
TRERF1Q96PN7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
TRERF1Q96PN7 RNU6-1099P-201ENST00000363533 107 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.49□□□□□ -1.85
TRERF1Q96PN7 HMGN2P18-201ENST00000450680 270 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.49□□□□□ -1.85
TRERF1Q96PN7 RNU6-795P-201ENST00000516323 103 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.49□□□□□ -1.85
TRERF1Q96PN7 MIR3163-201ENST00000581592 73 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 U7.3-201ENST00000616123 62 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 AC012531.4-201ENST00000616509 177 ntBASIC3.49□□□□□ -1.85
TRERF1Q96PN7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRERF1Q96PN7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.49□□□□□ -1.85
TRERF1Q96PN7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.48□□□□□ -1.85
TRERF1Q96PN7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRERF1Q96PN7 MIR548O-201ENST00000408583 114 ntBASIC3.48□□□□□ -1.85
TRERF1Q96PN7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms