Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC138Q96M89 RNU6-570P-201ENST00000517051 105 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 AC008269.2-201ENST00000561915 1105 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC138Q96M89 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC138Q96M89 AL353621.2-201ENST00000605340 133 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC138Q96M89 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC138Q96M89 U6.104-201ENST00000637979 90 ntBASIC1.9□□□□□ -2.11
CCDC138Q96M89 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC138Q96M89 RNU4-41P-201ENST00000364426 143 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 U8.7-201ENST00000364940 136 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 RNU6-1105P-201ENST00000384774 107 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 AC104332.1-201ENST00000440471 797 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 AC117454.1-201ENST00000491120 168 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 RNU7-115P-201ENST00000516433 55 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC138Q96M89 AC024405.2-202ENST00000532731 184 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 AC015688.6-201ENST00000577737 104 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 MIR8063-201ENST00000621930 81 ntBASIC1.89□□□□□ -2.11
CCDC138Q96M89 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC138Q96M89 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC138Q96M89 MIR337-201ENST00000362281 93 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 Y_RNA.16-201ENST00000362421 102 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 Y_RNA.140-201ENST00000363474 103 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 RNU6-338P-201ENST00000383888 105 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 MTND2P23-201ENST00000422990 651 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 Z98949.2-201ENST00000440996 144 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 AC245517.4-201ENST00000448601 281 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 TRBVB-201ENST00000477100 408 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 RNU6-1053P-201ENST00000515930 101 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 RNU6-1045P-201ENST00000516321 107 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 RNU6-1338P-201ENST00000516328 91 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 RNA5SP168-201ENST00000516642 112 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 MIR548AY-201ENST00000617669 107 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 MIR8062-201ENST00000621515 85 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC138Q96M89 SNORD3E-202ENST00000627253 216 ntBASIC1.88□□□□□ -2.11
CCDC138Q96M89 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC138Q96M89 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CCDC138Q96M89 SNORD33-201ENST00000362761 85 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 Y_RNA.376-201ENST00000365638 108 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 SNORA72.4-201ENST00000384174 132 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 RNU6-424P-201ENST00000384367 105 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 Y_RNA.512-201ENST00000384518 102 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 MIR513A1-201ENST00000385138 129 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 MIR660-201ENST00000385235 97 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 MIR1302-6-201ENST00000408466 90 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 CALM2P4-201ENST00000430810 426 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 AC003989.2-201ENST00000440224 169 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 RNU7-141P-201ENST00000459304 62 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 AC127455.1-201ENST00000565496 145 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC138Q96M89 AC099654.10-201ENST00000640395 161 ntBASIC1.87□□□□□ -2.11
CCDC138Q96M89 MIR302D-201ENST00000362275 68 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 SNORD68-201ENST00000363214 84 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 SNORD1A-201ENST00000364968 72 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 RNU1-78P-201ENST00000391248 165 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 U8.16-201ENST00000391279 133 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 RNU2-14P-201ENST00000411053 191 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 AL358176.2-201ENST00000425769 204 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 RPL23AP54-201ENST00000495129 419 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 AC091959.1-201ENST00000495857 238 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 SERF1AP1-201ENST00000514575 187 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 SUMO2P16-201ENST00000519475 264 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC138Q96M89 MIR4422-201ENST00000581938 83 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 AL078604.3-201ENST00000615580 211 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 AL591926.4-201ENST00000616895 298 ntBASIC1.86□□□□□ -2.11
CCDC138Q96M89 Y_RNA.149-201ENST00000363558 117 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 RNU6-899P-201ENST00000363947 107 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 RNU6-1048P-201ENST00000364054 107 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 RNA5SP259-201ENST00000365541 109 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 SNORA26.5-201ENST00000391215 123 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 AC079140.2-201ENST00000506193 142 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 SNORA27.4-201ENST00000516650 95 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 SCARNA24.2-201ENST00000516968 130 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 DEFB108E-201ENST00000524692 240 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 CBX3P4-201ENST00000538909 354 ntBASIC1.85□□□□□ -2.11
CCDC138Q96M89 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC138Q96M89 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC138Q96M89 MIR126-201ENST00000362291 85 ntBASIC1.84□□□□□ -2.11
CCDC138Q96M89 Y_RNA.47-201ENST00000362697 108 ntBASIC1.84□□□□□ -2.11
CCDC138Q96M89 Y_RNA.253-201ENST00000364562 112 ntBASIC1.84□□□□□ -2.11
CCDC138Q96M89 RNU6-763P-201ENST00000390865 106 ntBASIC1.84□□□□□ -2.11
CCDC138Q96M89 SNORA36B-201ENST00000410438 131 ntBASIC1.84□□□□□ -2.11
CCDC138Q96M89 HMGN1P7-201ENST00000491722 313 ntBASIC1.84□□□□□ -2.11
CCDC138Q96M89 MIRLET7C-201ENST00000362160 84 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 RNU6-1309P-201ENST00000363305 108 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 Y_RNA.203-201ENST00000364106 102 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 MTCO2P33-201ENST00000402100 465 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 AC107393.1-201ENST00000512403 346 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 RNA5SP445-201ENST00000515889 115 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 RNU7-12P-201ENST00000516030 62 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 RNA5SP182-201ENST00000516064 82 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 AC110588.1-201ENST00000559699 137 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 MIR4285-201ENST00000581001 85 ntBASIC1.83□□□□□ -2.12
CCDC138Q96M89 MIR4762-201ENST00000585261 75 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms