Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
TRIM47Q96LD4 U8.15-201ENST00000390947 134 ntBASIC3.8□□□□□ -1.8
TRIM47Q96LD4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.8□□□□□ -1.8
TRIM47Q96LD4 HSPE1P19-201ENST00000603327 295 ntBASIC3.8□□□□□ -1.8
TRIM47Q96LD4 AC013412.1-201ENST00000610687 192 ntBASIC3.8□□□□□ -1.8
TRIM47Q96LD4 U7.4-201ENST00000614961 63 ntBASIC3.8□□□□□ -1.8
TRIM47Q96LD4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM47Q96LD4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM47Q96LD4 Y_RNA.253-201ENST00000364562 112 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 Y_RNA.430-201ENST00000384081 110 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 RNU6-1201P-201ENST00000384227 107 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRIM47Q96LD4 MIR548O-201ENST00000408583 114 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 AC006539.3-201ENST00000454258 129 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 AL441985.1-201ENST00000457727 251 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 RPS23P4-201ENST00000487908 423 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 MIR3945-201ENST00000581853 98 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 HMGN2P15-201ENST00000585707 270 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 AC095038.3-201ENST00000634439 195 ntBASIC3.79□□□□□ -1.8
TRIM47Q96LD4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM47Q96LD4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM47Q96LD4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM47Q96LD4 RNA5SP295-201ENST00000362655 121 ntBASIC3.78□□□□□ -1.8
TRIM47Q96LD4 SNORA48.8-201ENST00000391324 134 ntBASIC3.78□□□□□ -1.8
TRIM47Q96LD4 AC125388.1-201ENST00000459631 156 ntBASIC3.78□□□□□ -1.8
TRIM47Q96LD4 RPL23AP63-201ENST00000498752 471 ntBASIC3.78□□□□□ -1.8
TRIM47Q96LD4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.78□□□□□ -1.8
TRIM47Q96LD4 MIR449C-201ENST00000516047 92 ntBASIC3.78□□□□□ -1.8
TRIM47Q96LD4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.78□□□□□ -1.8
TRIM47Q96LD4 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.78□□□□□ -1.8
TRIM47Q96LD4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM47Q96LD4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM47Q96LD4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.78□□□□□ -1.81
TRIM47Q96LD4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.81
TRIM47Q96LD4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM47Q96LD4 AL021368.2-201ENST00000606125 5352 ntBASIC3.77□□□□□ -1.81
TRIM47Q96LD4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM47Q96LD4 RNU6-743P-201ENST00000364151 106 ntBASIC3.77□□□□□ -1.81
TRIM47Q96LD4 Y_RNA.242-201ENST00000364473 110 ntBASIC3.77□□□□□ -1.81
TRIM47Q96LD4 RNU1-57P-201ENST00000384491 166 ntBASIC3.77□□□□□ -1.81
TRIM47Q96LD4 AC008885.1-201ENST00000514930 301 ntBASIC3.77□□□□□ -1.81
TRIM47Q96LD4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM47Q96LD4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM47Q96LD4 AC093010.3-201ENST00000570269 15214 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 RNA5SP432-201ENST00000362480 116 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 RNU6-438P-201ENST00000365561 103 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 Y_RNA.440-201ENST00000384120 114 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 Y_RNA.609-201ENST00000410669 89 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 RNU6-948P-201ENST00000516374 107 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 SNORD36C-201ENST00000516733 66 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 SNORD19.2-201ENST00000516978 73 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 MIR5047-201ENST00000579212 100 ntBASIC3.76□□□□□ -1.81
TRIM47Q96LD4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM47Q96LD4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TRIM47Q96LD4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM47Q96LD4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM47Q96LD4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM47Q96LD4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
TRIM47Q96LD4 Y_RNA.340-201ENST00000365330 92 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 MIR520G-201ENST00000385064 90 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 MIR147B-201ENST00000390185 80 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM47Q96LD4 Z98742.3-201ENST00000418637 326 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 HMGN1P18-201ENST00000457642 277 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 RNU1-61P-201ENST00000516107 151 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 RNU6-539P-201ENST00000516665 103 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 AL359075.3-201ENST00000613288 217 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 AC073308.1-201ENST00000623696 305 ntBASIC3.75□□□□□ -1.81
TRIM47Q96LD4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM47Q96LD4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM47Q96LD4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM47Q96LD4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
TRIM47Q96LD4 AC009487.4-201ENST00000624969 3585 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM47Q96LD4 Y_RNA.37-201ENST00000362606 108 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 SNORD115-28-201ENST00000363931 81 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 RNU6-457P-201ENST00000363999 107 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 Y_RNA.351-201ENST00000365436 96 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 RNU6-524P-201ENST00000384270 107 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 AL512326.2-201ENST00000426359 151 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 AC090255.1-201ENST00000495779 349 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 RNU6-523P-201ENST00000516304 54 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 RNU7-25P-201ENST00000516544 62 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 MIR3186-201ENST00000577404 85 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 MIR4778-201ENST00000577635 80 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 MIR4439-201ENST00000583746 80 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 AC087685.1-201ENST00000587507 141 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 AC008739.2-201ENST00000597006 317 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 AC091932.4-201ENST00000623386 200 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM47Q96LD4 ZNF271P-202ENST00000465539 1970 ntBASIC3.74□□□□□ -1.81
TRIM47Q96LD4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TRIM47Q96LD4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM47Q96LD4 SNORD115-27-201ENST00000364430 82 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms