Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 Pinc.1-201ENST00000616452 154 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHISA4Q96DD7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHISA4Q96DD7 MAPK10-322ENST00000641485 4530 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SHISA4Q96DD7 RNU6-1209P-201ENST00000363655 107 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 MIR27B-201ENST00000385129 97 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AC016909.1-201ENST00000415916 166 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AC009414.1-201ENST00000427200 443 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AL356320.1-201ENST00000429616 163 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 MTATP6P21-201ENST00000440681 189 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 RPS4XP11-201ENST00000446897 772 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 HMGN2P18-201ENST00000450680 270 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 SNORD11-201ENST00000459124 84 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 RPS26P45-201ENST00000471748 340 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 OR9P1P-201ENST00000496431 281 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AC097462.1-201ENST00000514125 324 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AC011604.1-201ENST00000545978 196 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AC091178.2-201ENST00000584401 117 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 JPX_2.1-201ENST00000614161 69 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.92□□□□□ -1.94
SHISA4Q96DD7 AC002064.3-201ENST00000623448 346 ntBASIC2.92□□□□□ -1.94
SHISA4Q96DD7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SHISA4Q96DD7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
SHISA4Q96DD7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 SNORD56.5-201ENST00000364281 72 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 RNU6-309P-201ENST00000364573 106 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 RNU6-1138P-201ENST00000365359 106 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 SNORD21-201ENST00000383953 95 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 RNA5SP127-201ENST00000411051 133 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 RNA5SP344-201ENST00000411081 104 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 RNU7-149P-201ENST00000516739 59 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 RNU6-844P-201ENST00000517175 102 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 MIR1273D-201ENST00000577266 86 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 UCA1.1-201ENST00000620952 75 ntBASIC2.91□□□□□ -1.94
SHISA4Q96DD7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.91□□□□□ -1.94
SHISA4Q96DD7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHISA4Q96DD7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
SHISA4Q96DD7 MIR562-201ENST00000384894 95 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 MIR624-201ENST00000385217 97 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 Y_RNA.651-201ENST00000459380 103 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 RN7SL636P-201ENST00000497504 294 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 RN7SKP19-201ENST00000516016 252 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 RNU6-168P-201ENST00000516189 101 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 RNU6-365P-201ENST00000517113 106 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 RNA5SP490-201ENST00000517141 136 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.9□□□□□ -1.95
SHISA4Q96DD7 MIR3117-201ENST00000584034 78 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 MIR4506-201ENST00000584693 77 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 U4.3-201ENST00000621047 82 ntBASIC2.9□□□□□ -1.95
SHISA4Q96DD7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.95
SHISA4Q96DD7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
SHISA4Q96DD7 Y_RNA.35-201ENST00000362601 101 ntBASIC2.89□□□□□ -1.95
SHISA4Q96DD7 RNU6-880P-201ENST00000384526 107 ntBASIC2.89□□□□□ -1.95
SHISA4Q96DD7 MIR1253-201ENST00000408273 105 ntBASIC2.89□□□□□ -1.95
SHISA4Q96DD7 UBBP3-201ENST00000445497 241 ntBASIC2.89□□□□□ -1.95
SHISA4Q96DD7 SNORA4.4-201ENST00000515921 135 ntBASIC2.89□□□□□ -1.95
SHISA4Q96DD7 RNU2-60P-201ENST00000517290 128 ntBASIC2.89□□□□□ -1.95
SHISA4Q96DD7 AL365205.2-201ENST00000594586 68 ntBASIC2.89□□□□□ -1.95
SHISA4Q96DD7 AC006254.2-201ENST00000603259 279 ntBASIC2.89□□□□□ -1.95
SHISA4Q96DD7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.89□□□□□ -1.95
SHISA4Q96DD7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHISA4Q96DD7 Y_RNA.52-201ENST00000362760 96 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 RNU1-72P-201ENST00000362976 153 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 RNA5SP89-201ENST00000410300 108 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 Y_RNA.649-201ENST00000459077 103 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 RNU6-504P-201ENST00000516568 104 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 RNU6-965P-201ENST00000516721 96 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 RNU1-104P-201ENST00000517280 175 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 AL022345.2-201ENST00000606307 135 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 AC025166.1-201ENST00000612411 163 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 MIR1248-201ENST00000629190 106 ntBASIC2.88□□□□□ -1.95
SHISA4Q96DD7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.88□□□□□ -1.95
SHISA4Q96DD7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.87□□□□□ -1.95
SHISA4Q96DD7 AC008555.8-201ENST00000623602 2168 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 RNU6-546P-201ENST00000383991 107 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 Y_RNA.486-201ENST00000384398 107 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 MIR520G-201ENST00000385064 90 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 RNU11-5P-201ENST00000391216 129 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 MIR891A-201ENST00000401237 79 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 U6atac.2-201ENST00000408644 118 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 AC007064.1-201ENST00000412238 351 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.87□□□□□ -1.95
SHISA4Q96DD7 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 RNU6-781P-201ENST00000516377 101 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 Y_RNA.694-201ENST00000516677 117 ntBASIC2.87□□□□□ -1.95
SHISA4Q96DD7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms