Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RPL23AP54-201ENST00000495129 419 ntBASIC2.56□□□□□ -2
RTF1Q92541 RNU6-1212P-201ENST00000517023 104 ntBASIC2.56□□□□□ -2
RTF1Q92541 RNU7-128P-201ENST00000517247 62 ntBASIC2.56□□□□□ -2
RTF1Q92541 AC015712.3-201ENST00000559380 164 ntBASIC2.56□□□□□ -2
RTF1Q92541 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.56□□□□□ -2
RTF1Q92541 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RTF1Q92541 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.56□□□□□ -2
RTF1Q92541 Y_RNA.24-201ENST00000362508 103 ntBASIC2.55□□□□□ -2
RTF1Q92541 snoU2_19.4-201ENST00000364329 80 ntBASIC2.55□□□□□ -2
RTF1Q92541 RNA5SP160-201ENST00000364866 120 ntBASIC2.55□□□□□ -2
RTF1Q92541 MIR520G-201ENST00000385064 90 ntBASIC2.55□□□□□ -2
RTF1Q92541 AL603908.1-201ENST00000406098 201 ntBASIC2.55□□□□□ -2
RTF1Q92541 RNU6-1186P-201ENST00000410429 97 ntBASIC2.55□□□□□ -2
RTF1Q92541 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.55□□□□□ -2
RTF1Q92541 AL445685.2-201ENST00000422551 342 ntBASIC2.55□□□□□ -2
RTF1Q92541 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.55□□□□□ -2
RTF1Q92541 AL021397.1-201ENST00000451806 248 ntBASIC2.55□□□□□ -2
RTF1Q92541 RNU6-437P-201ENST00000459408 95 ntBASIC2.55□□□□□ -2
RTF1Q92541 AC108210.2-201ENST00000503681 201 ntBASIC2.55□□□□□ -2
RTF1Q92541 RNA5SP182-201ENST00000516064 82 ntBASIC2.55□□□□□ -2
RTF1Q92541 RNU6-1219P-201ENST00000516143 112 ntBASIC2.55□□□□□ -2
RTF1Q92541 AC024995.1-201ENST00000523014 93 ntBASIC2.55□□□□□ -2
RTF1Q92541 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
RTF1Q92541 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.55□□□□□ -2
RTF1Q92541 AC002984.1-201ENST00000591692 448 ntBASIC2.55□□□□□ -2
RTF1Q92541 SNRPGP19-201ENST00000603826 189 ntBASIC2.55□□□□□ -2
RTF1Q92541 RNU2-4P-201ENST00000606190 192 ntBASIC2.55□□□□□ -2
RTF1Q92541 MIR6840-201ENST00000611937 71 ntBASIC2.55□□□□□ -2
RTF1Q92541 RNU1-58P-201ENST00000362413 163 ntBASIC2.54□□□□□ -2
RTF1Q92541 Y_RNA.75-201ENST00000362927 97 ntBASIC2.54□□□□□ -2
RTF1Q92541 RNU6-969P-201ENST00000383900 105 ntBASIC2.54□□□□□ -2
RTF1Q92541 MIR616-201ENST00000385293 97 ntBASIC2.54□□□□□ -2
RTF1Q92541 RNA5SP467-201ENST00000391274 118 ntBASIC2.54□□□□□ -2
RTF1Q92541 RPS4XP11-201ENST00000446897 772 ntBASIC2.54□□□□□ -2
RTF1Q92541 RNU1-142P-201ENST00000516682 145 ntBASIC2.54□□□□□ -2
RTF1Q92541 RNU1-40P-201ENST00000516816 164 ntBASIC2.54□□□□□ -2
RTF1Q92541 RNU1-97P-201ENST00000516872 164 ntBASIC2.54□□□□□ -2
RTF1Q92541 MRPS18CP4-201ENST00000535821 231 ntBASIC2.54□□□□□ -2
RTF1Q92541 AL031274.2-201ENST00000599419 203 ntBASIC2.54□□□□□ -2
RTF1Q92541 AC073413.2-201ENST00000604332 360 ntBASIC2.54□□□□□ -2
RTF1Q92541 AL391903.3-201ENST00000612158 163 ntBASIC2.54□□□□□ -2
RTF1Q92541 AC022202.1-201ENST00000613515 211 ntBASIC2.54□□□□□ -2
RTF1Q92541 U6.108-201ENST00000637764 58 ntBASIC2.54□□□□□ -2
RTF1Q92541 AP000553.5-201ENST00000641933 54 ntBASIC2.54□□□□□ -2
RTF1Q92541 AC245060.5-201ENST00000610778 3293 ntBASIC2.53□□□□□ -2
RTF1Q92541 AL596028.1-201ENST00000326971 197 ntBASIC2.53□□□□□ -2
RTF1Q92541 RNU6-312P-201ENST00000364629 107 ntBASIC2.53□□□□□ -2
RTF1Q92541 RNA5SP37-201ENST00000365420 130 ntBASIC2.53□□□□□ -2
RTF1Q92541 RNU6-136P-201ENST00000384663 107 ntBASIC2.53□□□□□ -2
RTF1Q92541 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.53□□□□□ -2
RTF1Q92541 AC090255.1-201ENST00000495779 349 ntBASIC2.53□□□□□ -2
RTF1Q92541 AC074198.2-201ENST00000508153 258 ntBASIC2.53□□□□□ -2
RTF1Q92541 MIR4744-201ENST00000581563 82 ntBASIC2.53□□□□□ -2
RTF1Q92541 AC005786.1-201ENST00000588553 154 ntBASIC2.53□□□□□ -2
RTF1Q92541 AC012640.5-201ENST00000623897 319 ntBASIC2.53□□□□□ -2
RTF1Q92541 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.52□□□□□ -2.01
RTF1Q92541 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTF1Q92541 RNA5SP432-201ENST00000362480 116 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 Y_RNA.23-201ENST00000362496 106 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 SNORD115-3-201ENST00000363100 82 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 SNORA40.18-201ENST00000391200 128 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 SNORA26.9-201ENST00000391322 122 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 RN7SKP51-201ENST00000410781 304 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 RPS26P45-201ENST00000471748 340 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 AC091178.2-201ENST00000584401 117 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 MIR6845-201ENST00000613182 61 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.52□□□□□ -2.01
RTF1Q92541 AC100821.1-201ENST00000523153 2479 ntBASIC2.52□□□□□ -2.01
RTF1Q92541 Y_RNA.182-201ENST00000363880 111 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 Y_RNA.229-201ENST00000364347 113 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 RNU6-275P-201ENST00000364910 107 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 Y_RNA.412-201ENST00000384001 104 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 Y_RNA.441-201ENST00000384123 112 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 Y_RNA.572-201ENST00000384757 98 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 MIR562-201ENST00000384894 95 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 RNA5SP496-201ENST00000391240 109 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 RNU6-383P-201ENST00000410864 94 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 Y_RNA.797-201ENST00000515977 94 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 RNU6-548P-201ENST00000517083 115 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 AC011604.1-201ENST00000545978 196 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.51□□□□□ -2.01
RTF1Q92541 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.51□□□□□ -2.01
RTF1Q92541 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTF1Q92541 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTF1Q92541 AC018630.2-201ENST00000534866 2403 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 RNU6-862P-201ENST00000362804 105 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 RNU6-578P-201ENST00000390980 103 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 RNU6-1228P-201ENST00000391014 107 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 RNA5SP323-201ENST00000391094 133 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 AL512604.1-201ENST00000404812 257 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 AC099677.2-201ENST00000436385 175 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 SUMO1P3-201ENST00000439961 304 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 RNU7-94P-201ENST00000459576 63 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 AC005840.1-201ENST00000498412 377 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 SCARNA8-201ENST00000515924 131 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 RNU6-1096P-201ENST00000517089 102 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 MIR2681-201ENST00000581814 105 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 MIR4769-201ENST00000584126 77 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 AL365434.2-201ENST00000607979 234 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms