Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MIR569-201ENST00000385228 96 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 SNORA3.2-201ENST00000408221 125 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 MIR1261-201ENST00000408659 82 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 RNU4-53P-201ENST00000410828 140 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.56□□□□□ -2
SH3RF2Q8TEC5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.56□□□□□ -2
SH3RF2Q8TEC5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 AC112693.2-201ENST00000556538 232 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 AC005786.1-201ENST00000588553 154 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 U6.108-201ENST00000637764 58 ntBASIC2.56□□□□□ -2
SH3RF2Q8TEC5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SH3RF2Q8TEC5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNU1-58P-201ENST00000362413 163 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNU6-1138P-201ENST00000365359 106 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNU6-597P-201ENST00000365620 102 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNU6-484P-201ENST00000384016 107 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNU2-70P-201ENST00000410718 179 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.55□□□□□ -2
SH3RF2Q8TEC5 OR9P1P-201ENST00000496431 281 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 AC234781.5-201ENST00000508429 271 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNU1-41P-201ENST00000516161 162 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNU1-48P-201ENST00000516400 162 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNU6-426P-201ENST00000516464 97 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 RNA5SP137-201ENST00000516833 135 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 AP002004.2-201ENST00000531656 154 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 AC104984.5-201ENST00000586878 94 ntBASIC2.55□□□□□ -2
SH3RF2Q8TEC5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SH3RF2Q8TEC5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SH3RF2Q8TEC5 RNU6-862P-201ENST00000362804 105 ntBASIC2.54□□□□□ -2
SH3RF2Q8TEC5 SNORA75.5-201ENST00000391291 81 ntBASIC2.54□□□□□ -2
SH3RF2Q8TEC5 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
SH3RF2Q8TEC5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.54□□□□□ -2
SH3RF2Q8TEC5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.54□□□□□ -2
SH3RF2Q8TEC5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.54□□□□□ -2
SH3RF2Q8TEC5 MIR548AI-201ENST00000579940 88 ntBASIC2.54□□□□□ -2
SH3RF2Q8TEC5 AL031274.2-201ENST00000599419 203 ntBASIC2.54□□□□□ -2
SH3RF2Q8TEC5 MIR3658-201ENST00000636291 56 ntBASIC2.54□□□□□ -2
SH3RF2Q8TEC5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
SH3RF2Q8TEC5 AC010332.2-201ENST00000613083 1904 ntBASIC2.54□□□□□ -2
SH3RF2Q8TEC5 ZNF658B-202ENST00000615961 3375 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 SNORD115-3-201ENST00000363100 82 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 RNU1-148P-201ENST00000384472 162 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 RNU6-1117P-201ENST00000384525 104 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 RNU6-768P-201ENST00000384683 107 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 SNORA40-201ENST00000388090 126 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 SNRPGP10-201ENST00000432323 225 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 AC245047.4-201ENST00000433189 144 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 AL163195.1-201ENST00000496941 348 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 SNORA25.12-201ENST00000516202 82 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 RNU7-149P-201ENST00000516739 59 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 AC087685.1-201ENST00000587507 141 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 Pinc.1-201ENST00000616452 154 ntBASIC2.53□□□□□ -2
SH3RF2Q8TEC5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 U8.2-201ENST00000363156 134 ntBASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 SNORA25.7-201ENST00000364375 127 ntBASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-818P-201ENST00000364837 108 ntBASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-1081P-201ENST00000384537 107 ntBASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 Z98742.3-201ENST00000418637 326 ntBASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 AL049830.1-201ENST00000468034 425 ntBASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 AC097639.2-201ENST00000603159 172 ntBASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.52□□□□□ -2.01
SH3RF2Q8TEC5 MAPK10-266ENST00000641066 6555 ntBASIC2.51□□□□□ -2.01
SH3RF2Q8TEC5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SH3RF2Q8TEC5 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
SH3RF2Q8TEC5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.51□□□□□ -2.01
SH3RF2Q8TEC5 Y_RNA.586-201ENST00000391146 98 ntBASIC2.51□□□□□ -2.01
SH3RF2Q8TEC5 RNU2-56P-201ENST00000516826 190 ntBASIC2.51□□□□□ -2.01
SH3RF2Q8TEC5 AC046143.2-201ENST00000609789 160 ntBASIC2.51□□□□□ -2.01
SH3RF2Q8TEC5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SH3RF2Q8TEC5 ZNF702P-202ENST00000434269 1966 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 SNORA33-201ENST00000363664 130 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 Y_RNA.634-201ENST00000364811 113 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-959P-201ENST00000384671 107 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 AC099677.2-201ENST00000436385 175 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 AC069257.2-201ENST00000441819 155 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-62P-201ENST00000516526 102 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-365P-201ENST00000517113 106 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 AC069114.2-201ENST00000604699 304 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 AC103810.6-201ENST00000606708 136 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 MIR6715A-201ENST00000615929 79 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.5□□□□□ -2.01
SH3RF2Q8TEC5 Y_RNA.291-201ENST00000364886 113 ntBASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-257P-201ENST00000410238 98 ntBASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 AC026436.1-201ENST00000510537 270 ntBASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 RNU7-28P-201ENST00000516759 62 ntBASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 AC090142.3-201ENST00000519012 385 ntBASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 AC120024.3-201ENST00000603167 156 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms