Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 RNU6-312P-201ENST00000364629 107 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 MIR562-201ENST00000384894 95 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 RNA5SP496-201ENST00000391240 109 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 AC074198.2-201ENST00000508153 258 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 MIR514B-201ENST00000516774 80 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 RNU6-453P-201ENST00000516819 85 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 SNORA31.25-201ENST00000517242 134 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 MRPS18CP4-201ENST00000535821 231 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 MIR4744-201ENST00000581563 82 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCHCR1Q8TD31 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 RNA5SP138-201ENST00000365098 114 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 Y_RNA.412-201ENST00000384001 104 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 SNORA48.1-201ENST00000390879 135 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 RNU6-1228P-201ENST00000391014 107 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 RNU2-40P-201ENST00000410833 196 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 RNU6-1212P-201ENST00000517023 104 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 MIR2681-201ENST00000581814 105 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 MIR4448-201ENST00000584360 86 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 AC069114.2-201ENST00000604699 304 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 AL359851.1-201ENST00000569460 4997 ntBASIC2.29□□□□□ -2.04
CCHCR1Q8TD31 Y_RNA.182-201ENST00000363880 111 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 RNU6-1019P-201ENST00000364424 107 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 RNU6-275P-201ENST00000364910 107 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 RNU6-578P-201ENST00000390980 103 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AC245047.4-201ENST00000433189 144 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 RPS27P1-201ENST00000450552 247 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 TRBV12-1-201ENST00000479785 344 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AC008413.1-201ENST00000511864 177 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 RNU6-1291P-201ENST00000516591 104 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AC084364.2-201ENST00000546924 395 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AC022217.4-201ENST00000604389 163 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AC108706.1-201ENST00000611053 297 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AL590808.1-201ENST00000618696 141 ntBASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCHCR1Q8TD31 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 Y_RNA.23-201ENST00000362496 106 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 Y_RNA.796-201ENST00000364268 102 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 RNU4-41P-201ENST00000364426 143 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 Y_RNA.799-201ENST00000364992 102 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 Y_RNA.441-201ENST00000384123 112 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 RNY3P5-201ENST00000384127 102 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 AL512604.1-201ENST00000404812 257 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 AC245047.8-201ENST00000456455 284 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 Y_RNA.797-201ENST00000515977 94 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 RNU1-40P-201ENST00000516816 164 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 RNU1-97P-201ENST00000516872 164 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 MIR5094-201ENST00000578766 85 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.27□□□□□ -2.05
CCHCR1Q8TD31 Y_RNA.267-201ENST00000364679 109 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 RNU6-1080P-201ENST00000383982 107 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 MT-TT-201ENST00000387460 66 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 AL606845.1-201ENST00000404881 255 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 AL356379.1-201ENST00000414105 126 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 AL356320.1-201ENST00000429616 163 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 MTND2P29-201ENST00000438595 412 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 AL606517.2-201ENST00000442855 241 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 AC233266.1-201ENST00000454518 96 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 SNORD11-201ENST00000459124 84 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 RNVU1-2-201ENST00000516326 135 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 AP002004.2-201ENST00000531656 154 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 AC242852.1-201ENST00000612151 96 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 AC244015.1-201ENST00000622301 99 ntBASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCHCR1Q8TD31 RNU6-1209P-201ENST00000363655 107 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 RNA5SP338-201ENST00000410495 85 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 RNU6-394P-201ENST00000410735 107 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 RNU5E-9P-201ENST00000411164 104 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 RNA5SP450-201ENST00000411206 102 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 AC025033.1-201ENST00000463883 194 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 AC005840.1-201ENST00000498412 377 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 RPL23AP94-201ENST00000512518 302 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 RNU6-1007P-201ENST00000516586 107 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 RNA5SP364-201ENST00000516938 78 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 AC109810.1-201ENST00000534066 224 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 SUB1P4-201ENST00000566062 339 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 uc_338.20-201ENST00000621563 178 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 MIR6873-201ENST00000622788 63 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 AC064859.1-201ENST00000624741 174 ntBASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCHCR1Q8TD31 SNORA1B-201ENST00000362535 133 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 239.8 ms