Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 SNORD63-201ENST00000384262 68 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 Y_RNA.462-201ENST00000384268 102 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 RNU6-1011P-201ENST00000384668 107 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 AL078595.1-201ENST00000404458 226 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 RNU6-985P-201ENST00000410182 104 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 RNU2-56P-201ENST00000516826 190 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 Y_RNA.713-201ENST00000517013 96 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 RNU6-570P-201ENST00000517051 105 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 SUMO2P16-201ENST00000519475 264 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 MIR4778-201ENST00000577635 80 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 SNORA77B-201ENST00000578179 125 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 MIR3684-201ENST00000579779 74 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 MIR4422-201ENST00000581938 83 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 AP001485.1-201ENST00000604799 199 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 AC106754.2-201ENST00000623006 233 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 AC068647.2-201ENST00000637380 353 ntBASIC1.1□□□□□ -2.23
LINC01555Q8NAE3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 SNORA63-201ENST00000363450 132 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 RNU6-770P-201ENST00000363929 105 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 SNORA63.7-201ENST00000365579 123 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 Y_RNA.541-201ENST00000384640 113 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 MIR606-201ENST00000384851 96 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 RNU6-360P-201ENST00000390944 104 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 SNORD115-46-201ENST00000390982 71 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 RNU1-78P-201ENST00000391248 165 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 RNU2-14P-201ENST00000411053 191 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 CALM2P4-201ENST00000430810 426 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 JTBP1-201ENST00000441314 247 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 RPS20P10-201ENST00000451209 253 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 SNORA70.12-201ENST00000516084 153 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 RNU6-496P-201ENST00000516145 99 ntBASIC1.09□□□□□ -2.23
LINC01555Q8NAE3 WWP1P1-201ENST00000466609 2769 ntBASIC1.09□□□□□ -2.24
LINC01555Q8NAE3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.09□□□□□ -2.24
LINC01555Q8NAE3 RNA5SP259-201ENST00000365541 109 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.380-201ENST00000365663 111 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 AL162725.1-201ENST00000435405 301 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 DYNLT3P2-201ENST00000442517 295 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 HSPE1P13-201ENST00000451143 297 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 AC093850.1-201ENST00000454121 251 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 AC117454.1-201ENST00000491120 168 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 SEPT14P8-201ENST00000508026 178 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 AL355297.3-201ENST00000604082 446 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 SNORD113-5-201ENST00000607261 78 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01555Q8NAE3 AL161722.3-201ENST00000605789 2983 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 RNY1P10-201ENST00000363268 113 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 RNU4-41P-201ENST00000364426 143 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 AC117470.1-201ENST00000381974 330 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 MIR150-201ENST00000385048 84 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 U8.16-201ENST00000391279 133 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 RN7SKP200-201ENST00000410564 320 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 SUMO1P2-201ENST00000452524 304 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 RNU7-94P-201ENST00000459576 63 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 RNU6-635P-201ENST00000516651 102 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 RNU6-341P-201ENST00000516973 96 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 AP003733.2-201ENST00000529409 171 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 AC011604.1-201ENST00000545978 196 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 AC008737.2-201ENST00000599446 118 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.812-201ENST00000610788 101 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.784-201ENST00000613803 101 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.787-201ENST00000616522 101 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.780-201ENST00000617336 101 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.801-201ENST00000619005 101 ntBASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01555Q8NAE3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 SNORD68-201ENST00000363214 84 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 SNORA63C-201ENST00000364578 129 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 RNU6-1160P-201ENST00000384546 104 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.569-201ENST00000384749 103 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 MIR194-1-201ENST00000384892 85 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 RNU6-955P-201ENST00000410497 104 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 AL161935.2-201ENST00000414627 60 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 AL390729.2-201ENST00000416137 156 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 MLLT10P1-201ENST00000418346 262 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 PIGPP3-201ENST00000425307 415 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 Z98949.2-201ENST00000440996 144 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 PGBD4P5-201ENST00000445958 426 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 AL049830.1-201ENST00000468034 425 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 OR9P1P-201ENST00000496431 281 ntBASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.06□□□□□ -2.24
LINC01555Q8NAE3 Y_RNA.720-201ENST00000517166 92 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms