Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR184-201ENST00000384962 84 ntBASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 RNU11-3P-201ENST00000391111 133 ntBASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 RNA5SP89-201ENST00000410300 108 ntBASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 RNA5SP274-201ENST00000410484 108 ntBASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 RNU2-55P-201ENST00000411146 174 ntBASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 AC131055.1-201ENST00000584626 316 ntBASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 JPX_2.1-201ENST00000614161 69 ntBASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
NPAS4Q8IUM7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 Y_RNA.203-201ENST00000364106 102 ntBASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 RNU6-309P-201ENST00000364573 106 ntBASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 RPS26P45-201ENST00000471748 340 ntBASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 RNU6-341P-201ENST00000516973 96 ntBASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 RNU2-60P-201ENST00000517290 128 ntBASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 AC104027.1-201ENST00000521887 300 ntBASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 AL358944.1-201ENST00000528537 144 ntBASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 AL670379.3-201ENST00000605040 251 ntBASIC3.13□□□□□ -1.91
NPAS4Q8IUM7 ZNF271P-202ENST00000465539 1970 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 Y_RNA.35-201ENST00000362601 101 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 Y_RNA.634-201ENST00000364811 113 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 SNORD58C-201ENST00000365223 64 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 RNU2-70P-201ENST00000410718 179 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 BX510359.4-201ENST00000423750 193 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 RNU6-168P-201ENST00000516189 101 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 Y_RNA.690-201ENST00000516603 95 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 AC079600.2-201ENST00000550076 130 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 AL160236.1-201ENST00000556317 195 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 RPL23AP91-201ENST00000569211 455 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 RMST_8.1-201ENST00000610287 165 ntBASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
NPAS4Q8IUM7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 RNU4-82P-201ENST00000362443 140 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 SNORD116-21-201ENST00000384507 92 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 MIR548A3-201ENST00000385297 97 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 SUMO1P4-201ENST00000429430 302 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 AC233266.1-201ENST00000454518 96 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 SNORD109B-201ENST00000458961 67 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 SNORD109A-201ENST00000459128 67 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 RNU6-781P-201ENST00000516377 101 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 Y_RNA.714-201ENST00000517065 90 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 RNU7-128P-201ENST00000517247 62 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 AC242852.1-201ENST00000612151 96 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 uc_338.4-201ENST00000616635 176 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 AC244015.1-201ENST00000622301 99 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 MIR7153-201ENST00000637758 57 ntBASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS4Q8IUM7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 Y_RNA.267-201ENST00000364679 109 ntBASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 SNORD18B-201ENST00000365659 72 ntBASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 MIR518A2-201ENST00000384966 87 ntBASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 MIR524-201ENST00000385242 87 ntBASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 AP002004.2-201ENST00000531656 154 ntBASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 AC008555.8-201ENST00000623602 2168 ntBASIC3.1□□□□□ -1.91
NPAS4Q8IUM7 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 RNU1-52P-201ENST00000384190 164 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 HMGN2P39-201ENST00000398005 273 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 AL603914.1-201ENST00000401964 204 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 Y_RNA.617-201ENST00000410920 90 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 RPL39P40-201ENST00000445481 146 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 SNORD77.4-201ENST00000516158 81 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 RNA5SP153-201ENST00000516498 76 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 SNORA64.4-201ENST00000516632 81 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 MIR3945-201ENST00000581853 98 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 MIR3124-201ENST00000582636 67 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 AC091178.2-201ENST00000584401 117 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 AC078899.2-201ENST00000595282 212 ntBASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NPAS4Q8IUM7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NPAS4Q8IUM7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 RNU6-1019P-201ENST00000364424 107 ntBASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 MIR196B-201ENST00000384852 84 ntBASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 MIR548A1-201ENST00000385041 97 ntBASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 AL163195.1-201ENST00000496941 348 ntBASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 MIR4435-1-201ENST00000582552 80 ntBASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 AL121890.5-201ENST00000620848 304 ntBASIC3.08□□□□□ -1.92
NPAS4Q8IUM7 RNA5SP383-201ENST00000362934 120 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 RNU6-1209P-201ENST00000363655 107 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 Y_RNA.796-201ENST00000364268 102 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 Y_RNA.242-201ENST00000364473 110 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 Y_RNA.799-201ENST00000364992 102 ntBASIC3.07□□□□□ -1.92
NPAS4Q8IUM7 Y_RNA.309-201ENST00000365046 111 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms