Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 U8.17-201ENST00000391292 132 ntBASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 AL109933.2-201ENST00000452651 260 ntBASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 AL163195.1-201ENST00000496941 348 ntBASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 RNA5SP367-201ENST00000516557 118 ntBASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 AC024995.1-201ENST00000523014 93 ntBASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 AC068339.1-201ENST00000526965 141 ntBASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.73□□□□□ -1.81
PRPF38BQ5VTL8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 MIR494-201ENST00000349529 81 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 Y_RNA.78-201ENST00000362970 110 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 SNORA25B-201ENST00000365507 128 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 RNU6-220P-201ENST00000390919 107 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 RN7SL863P-201ENST00000462370 296 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 AC010401.1-201ENST00000463867 348 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 AC018868.1-201ENST00000491307 315 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 RNU6-830P-201ENST00000516353 107 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 IGKV3-31-201ENST00000523109 329 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 AC021443.1-201ENST00000604478 211 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 AC006441.5-201ENST00000612680 209 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 MIR2052-201ENST00000636055 55 ntBASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.72□□□□□ -1.81
PRPF38BQ5VTL8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 RNY1P10-201ENST00000363268 113 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 RNU6-1072P-201ENST00000384703 107 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 RNU6-443P-201ENST00000384780 107 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 MT-TI-201ENST00000387365 69 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 MIR1287-201ENST00000408492 90 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 AC108938.1-201ENST00000451204 136 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 RNU6-904P-201ENST00000516206 101 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 RNVU1-4-201ENST00000612985 164 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 ZNF720P1-201ENST00000562403 1939 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 MAPK10-362ENST00000641864 4484 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.82
PRPF38BQ5VTL8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 Y_RNA.37-201ENST00000362606 108 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 RNU1-133P-201ENST00000364867 167 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 Y_RNA.508-201ENST00000384502 114 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 AL445646.1-201ENST00000431784 216 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 AC105272.1-201ENST00000438604 198 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 RNU1-131P-201ENST00000458943 161 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 AC008413.1-201ENST00000511864 177 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 AC008885.1-201ENST00000514930 301 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 AC141557.1-201ENST00000540982 400 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 MIR2682-201ENST00000580305 110 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 AC093010.3-201ENST00000570269 15214 ntBASIC3.7□□□□□ -1.82
PRPF38BQ5VTL8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 RNU6-862P-201ENST00000362804 105 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 U8.2-201ENST00000363156 134 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 RNU6-268P-201ENST00000364174 107 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 Y_RNA.342-201ENST00000365352 113 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 Y_RNA.547-201ENST00000384654 119 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 CST2P1-201ENST00000425770 87 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 RNA5SP24-201ENST00000516478 95 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 SNORD45.4-201ENST00000516629 73 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 SNORA18.7-201ENST00000516910 131 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 AC007536.1-201ENST00000533382 349 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 CTSLP2-204ENST00000629029 392 ntBASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.69□□□□□ -1.82
PRPF38BQ5VTL8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 Y_RNA.265-201ENST00000364677 108 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 AC107297.1-201ENST00000459991 176 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 AC006483.1-201ENST00000487308 313 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 RNA5SP458-201ENST00000516188 119 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 SNORD36C-201ENST00000516733 66 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 AC026421.1-201ENST00000519101 163 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 SUMO2P16-201ENST00000519475 264 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 SNORA50A-202ENST00000629536 136 ntBASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRPF38BQ5VTL8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF38BQ5VTL8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRPF38BQ5VTL8 MIR302B-201ENST00000362188 73 ntBASIC3.67□□□□□ -1.82
PRPF38BQ5VTL8 Y_RNA.344-201ENST00000365381 112 ntBASIC3.67□□□□□ -1.82
PRPF38BQ5VTL8 RNY1P6-201ENST00000384193 109 ntBASIC3.67□□□□□ -1.82
PRPF38BQ5VTL8 MIR764-201ENST00000390811 85 ntBASIC3.67□□□□□ -1.82
PRPF38BQ5VTL8 EEF1A1P41-201ENST00000414667 207 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms