Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC093259.1-201ENST00000509755 300 ntBASIC1.63□□□□□ -2.15
LMO4P61968 AC010598.1-201ENST00000510378 103 ntBASIC1.63□□□□□ -2.15
LMO4P61968 RNU6-548P-201ENST00000517083 115 ntBASIC1.63□□□□□ -2.15
LMO4P61968 AC025647.1-201ENST00000517879 253 ntBASIC1.63□□□□□ -2.15
LMO4P61968 IGLV3-17-201ENST00000519099 244 ntBASIC1.63□□□□□ -2.15
LMO4P61968 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.63□□□□□ -2.15
LMO4P61968 MIR4744-201ENST00000581563 82 ntBASIC1.63□□□□□ -2.15
LMO4P61968 MIR548AY-201ENST00000617669 107 ntBASIC1.63□□□□□ -2.15
LMO4P61968 MTND1P7-201ENST00000632801 297 ntBASIC1.63□□□□□ -2.15
LMO4P61968 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.63□□□□□ -2.15
LMO4P61968 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LMO4P61968 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LMO4P61968 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.63□□□□□ -2.15
LMO4P61968 AC008555.8-201ENST00000623602 2168 ntBASIC1.62□□□□□ -2.15
LMO4P61968 AC009487.4-201ENST00000624969 3585 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNU6-103P-201ENST00000363686 107 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNA5SP99-201ENST00000364020 114 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNU6-818P-201ENST00000364837 108 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNU6-407P-201ENST00000365280 104 ntBASIC1.62□□□□□ -2.15
LMO4P61968 SNORD50.2-201ENST00000365465 70 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNU6-449P-201ENST00000383914 107 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNA5SP465-201ENST00000391195 109 ntBASIC1.62□□□□□ -2.15
LMO4P61968 SNORA40.18-201ENST00000391200 128 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNU6-383P-201ENST00000410864 94 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNA5SP450-201ENST00000411206 102 ntBASIC1.62□□□□□ -2.15
LMO4P61968 EBAG9P1-201ENST00000418955 543 ntBASIC1.62□□□□□ -2.15
LMO4P61968 AL606753.1-201ENST00000427435 87 ntBASIC1.62□□□□□ -2.15
LMO4P61968 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.62□□□□□ -2.15
LMO4P61968 HMGN2P18-201ENST00000450680 270 ntBASIC1.62□□□□□ -2.15
LMO4P61968 AC245047.8-201ENST00000456455 284 ntBASIC1.62□□□□□ -2.15
LMO4P61968 AC010531.2-201ENST00000465012 153 ntBASIC1.62□□□□□ -2.15
LMO4P61968 AC010409.1-201ENST00000487382 476 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNU7-115P-201ENST00000516433 55 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNU6-1007P-201ENST00000516586 107 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNU6-63P-201ENST00000516690 95 ntBASIC1.62□□□□□ -2.15
LMO4P61968 RNA5SP490-201ENST00000517141 136 ntBASIC1.62□□□□□ -2.15
LMO4P61968 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.62□□□□□ -2.15
LMO4P61968 MIR6840-201ENST00000611937 71 ntBASIC1.62□□□□□ -2.15
LMO4P61968 AL353997.5-201ENST00000618886 171 ntBASIC1.62□□□□□ -2.15
LMO4P61968 ZNF720P1-201ENST00000562403 1939 ntBASIC1.62□□□□□ -2.15
LMO4P61968 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LMO4P61968 RNU6-271P-201ENST00000363858 105 ntBASIC1.61□□□□□ -2.15
LMO4P61968 Y_RNA.229-201ENST00000364347 113 ntBASIC1.61□□□□□ -2.15
LMO4P61968 Y_RNA.357-201ENST00000365487 109 ntBASIC1.61□□□□□ -2.15
LMO4P61968 RNU6-438P-201ENST00000365561 103 ntBASIC1.61□□□□□ -2.15
LMO4P61968 RNU6-1235P-201ENST00000384559 107 ntBASIC1.61□□□□□ -2.15
LMO4P61968 MIR616-201ENST00000385293 97 ntBASIC1.61□□□□□ -2.15
LMO4P61968 AL512604.1-201ENST00000404812 257 ntBASIC1.61□□□□□ -2.15
LMO4P61968 RNU6-498P-201ENST00000459468 107 ntBASIC1.61□□□□□ -2.15
LMO4P61968 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.61□□□□□ -2.15
LMO4P61968 RNA5SP20-201ENST00000515976 84 ntBASIC1.61□□□□□ -2.15
LMO4P61968 RNU6-948P-201ENST00000516374 107 ntBASIC1.61□□□□□ -2.15
LMO4P61968 SNORD116-25-201ENST00000516517 92 ntBASIC1.61□□□□□ -2.15
LMO4P61968 AC109810.1-201ENST00000534066 224 ntBASIC1.61□□□□□ -2.15
LMO4P61968 MIR4724-201ENST00000579485 89 ntBASIC1.61□□□□□ -2.15
LMO4P61968 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.61□□□□□ -2.15
LMO4P61968 SNRPGP19-201ENST00000603826 189 ntBASIC1.61□□□□□ -2.15
LMO4P61968 AP003357.1-201ENST00000604497 148 ntBASIC1.61□□□□□ -2.15
LMO4P61968 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.61□□□□□ -2.15
LMO4P61968 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LMO4P61968 AC005336.3-201ENST00000623833 2679 ntBASIC1.6□□□□□ -2.15
LMO4P61968 ZNF702P-202ENST00000434269 1966 ntBASIC1.6□□□□□ -2.15
LMO4P61968 MIR367-201ENST00000362299 68 ntBASIC1.6□□□□□ -2.15
LMO4P61968 RNA5SP276-201ENST00000362580 94 ntBASIC1.6□□□□□ -2.15
LMO4P61968 RNU6-117P-201ENST00000365415 107 ntBASIC1.6□□□□□ -2.15
LMO4P61968 RNU6-144P-201ENST00000383951 107 ntBASIC1.6□□□□□ -2.15
LMO4P61968 Y_RNA.400-201ENST00000383963 111 ntBASIC1.6□□□□□ -2.15
LMO4P61968 MT-TT-201ENST00000387460 66 ntBASIC1.6□□□□□ -2.15
LMO4P61968 RNU6-239P-201ENST00000390990 99 ntBASIC1.6□□□□□ -2.15
LMO4P61968 RNU6-131P-201ENST00000391144 107 ntBASIC1.6□□□□□ -2.15
LMO4P61968 SNORA36B-201ENST00000410438 131 ntBASIC1.6□□□□□ -2.15
LMO4P61968 AC008134.1-201ENST00000420943 193 ntBASIC1.6□□□□□ -2.15
LMO4P61968 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.6□□□□□ -2.15
LMO4P61968 AL445685.2-201ENST00000422551 342 ntBASIC1.6□□□□□ -2.15
LMO4P61968 BX510359.4-201ENST00000423750 193 ntBASIC1.6□□□□□ -2.15
LMO4P61968 MTCO1P44-201ENST00000441935 243 ntBASIC1.6□□□□□ -2.15
LMO4P61968 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.6□□□□□ -2.15
LMO4P61968 RNU2-34P-201ENST00000516534 121 ntBASIC1.6□□□□□ -2.15
LMO4P61968 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.6□□□□□ -2.15
LMO4P61968 AC127455.1-201ENST00000565496 145 ntBASIC1.6□□□□□ -2.15
LMO4P61968 MIR4431-201ENST00000579990 94 ntBASIC1.6□□□□□ -2.15
LMO4P61968 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.6□□□□□ -2.15
LMO4P61968 AL391903.3-201ENST00000612158 163 ntBASIC1.6□□□□□ -2.15
LMO4P61968 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.6□□□□□ -2.15
LMO4P61968 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
LMO4P61968 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LMO4P61968 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
LMO4P61968 MIR340-201ENST00000362125 95 ntBASIC1.59□□□□□ -2.15
LMO4P61968 RNU6-151P-201ENST00000364158 107 ntBASIC1.59□□□□□ -2.15
LMO4P61968 Y_RNA.215-201ENST00000364204 112 ntBASIC1.59□□□□□ -2.15
LMO4P61968 RNA5SP160-201ENST00000364866 120 ntBASIC1.59□□□□□ -2.15
LMO4P61968 Y_RNA.332-201ENST00000365271 113 ntBASIC1.59□□□□□ -2.15
LMO4P61968 RNU6-1323P-201ENST00000384025 107 ntBASIC1.59□□□□□ -2.15
LMO4P61968 RNU6-160P-201ENST00000384591 107 ntBASIC1.59□□□□□ -2.15
LMO4P61968 RNU11-3P-201ENST00000391111 133 ntBASIC1.59□□□□□ -2.15
LMO4P61968 MIR548I2-201ENST00000408348 149 ntBASIC1.59□□□□□ -2.15
LMO4P61968 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.59□□□□□ -2.15
LMO4P61968 AC025033.1-201ENST00000463883 194 ntBASIC1.59□□□□□ -2.15
LMO4P61968 RPS27P21-201ENST00000486977 252 ntBASIC1.59□□□□□ -2.15
LMO4P61968 RPL36AP21-201ENST00000490372 323 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms