Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.2□□□□□ -2.6
UBE2D3P61077 SNORD115-44-201ENST00000365391 82 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 SNORA20B-201ENST00000384220 132 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
UBE2D3P61077 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.21□□□□□ -2.6
UBE2D3P61077 RNU6-855P-201ENST00000410395 104 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 snoU13.2-201ENST00000459201 104 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 MTCO3P38-201ENST00000468910 766 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 AC011352.1-201ENST00000512300 793 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 MIR4307-201ENST00000582802 84 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 MIR6082-201ENST00000613604 109 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 AC013437.2-201ENST00000639587 677 ntBASIC-1.21□□□□□ -2.6
UBE2D3P61077 RNU6-502P-201ENST00000362419 108 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 RNU4-16P-201ENST00000364737 141 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 SNORD50B-201ENST00000364995 70 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 MT-TY-201ENST00000387409 66 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 MTCYBP36-201ENST00000404146 440 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 SNORD110-201ENST00000408189 75 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.22□□□□□ -2.6
UBE2D3P61077 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.22□□□□□ -2.6
UBE2D3P61077 AL137792.2-201ENST00000443484 235 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 MTND4P18-201ENST00000447010 465 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.22□□□□□ -2.6
UBE2D3P61077 SNORA13-201ENST00000458790 133 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.22□□□□□ -2.6
UBE2D3P61077 RNA5SP20-201ENST00000515976 84 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 RNU7-188P-201ENST00000517063 64 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 AC140658.3-201ENST00000567603 271 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 MTND5P34-201ENST00000568888 325 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 AL133255.1-201ENST00000606374 441 ntBASIC-1.22□□□□□ -2.6
UBE2D3P61077 RNU6-227P-201ENST00000362865 103 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 RNA5SP245-201ENST00000364239 121 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 RNU6-708P-201ENST00000384217 107 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 SNORD93-201ENST00000408813 74 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 SNX3P1X-201ENST00000414887 175 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 RPL22P17-201ENST00000438729 315 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 HMGN2P32-201ENST00000444648 269 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 RNU6-765P-201ENST00000516916 99 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 RNA5SP54-201ENST00000516951 92 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 AC131281.1-201ENST00000522984 164 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 AC093023.1-201ENST00000547375 507 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 MTND3P13-201ENST00000574391 343 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 MIR3165-201ENST00000579874 75 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 MIR4306-201ENST00000583390 91 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 AC011458.1-201ENST00000604034 617 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 AC112487.2-201ENST00000637950 304 ntBASIC-1.23□□□□□ -2.61
UBE2D3P61077 MTND5P18-201ENST00000445624 1801 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 RNU6-407P-201ENST00000365280 104 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 RNU6-535P-201ENST00000384722 107 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 AC006210.1-201ENST00000424882 111 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 UQCRBP2-201ENST00000447827 297 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 RNU2-11P-201ENST00000459191 187 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 MTCO2P29-201ENST00000465212 189 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 GMFBP1-201ENST00000467831 427 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 AC018710.1-201ENST00000506509 158 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 RNU6-830P-201ENST00000516353 107 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 MTATP6P15-201ENST00000527233 835 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.24□□□□□ -2.61
UBE2D3P61077 AC068137.4-201ENST00000638485 296 ntBASIC-1.24□□□□□ -2.61
UBE2D3P61077 SNORD115-7-201ENST00000365306 82 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 AL590002.1-201ENST00000406554 418 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 AC119618.1-201ENST00000434191 222 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 MTCO2P3-201ENST00000442543 421 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 AC244505.6-201ENST00000452829 130 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 MTCO2P6-201ENST00000463134 685 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.25□□□□□ -2.61
UBE2D3P61077 AC010587.1-201ENST00000505809 469 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 RNA5SP461-201ENST00000516451 104 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 RNU6-175P-201ENST00000516896 107 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 RNU6-612P-201ENST00000516909 102 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 RNU6-334P-201ENST00000517072 102 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 SNORA25.17-201ENST00000517184 124 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 RNU7-181P-201ENST00000517234 74 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 AC040926.1-201ENST00000530195 238 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 MIR3179-1-201ENST00000578940 84 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 MIR3179-2-201ENST00000579107 84 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 MIR3179-3-201ENST00000579566 84 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.25□□□□□ -2.61
UBE2D3P61077 RMST_3.1-201ENST00000611651 109 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 MIR3179-4-201ENST00000617599 84 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 AL627230.5-201ENST00000619807 58 ntBASIC-1.25□□□□□ -2.61
UBE2D3P61077 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
UBE2D3P61077 SNORA27.1-201ENST00000362604 124 ntBASIC-1.26□□□□□ -2.61
UBE2D3P61077 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.26□□□□□ -2.61
UBE2D3P61077 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.26□□□□□ -2.61
UBE2D3P61077 RNU6-136P-201ENST00000384663 107 ntBASIC-1.26□□□□□ -2.61
UBE2D3P61077 SNORD38B-201ENST00000384690 67 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms