Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SNORD116-15-201ENST00000384445 92 ntBASIC2.96□□□□□ -1.94
CHMP4BP1P59074 SNORD116-19-201ENST00000384729 92 ntBASIC2.96□□□□□ -1.94
CHMP4BP1P59074 MIR562-201ENST00000384894 95 ntBASIC2.96□□□□□ -1.94
CHMP4BP1P59074 AL117342.1-201ENST00000404861 406 ntBASIC2.96□□□□□ -1.94
CHMP4BP1P59074 RNU6-1186P-201ENST00000410429 97 ntBASIC2.96□□□□□ -1.94
CHMP4BP1P59074 MIR4635-201ENST00000583759 79 ntBASIC2.96□□□□□ -1.94
CHMP4BP1P59074 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.96□□□□□ -1.94
CHMP4BP1P59074 uc_338.4-201ENST00000616635 176 ntBASIC2.96□□□□□ -1.94
CHMP4BP1P59074 MIR26A1-201ENST00000362205 77 ntBASIC2.95□□□□□ -1.94
CHMP4BP1P59074 VTRNA1-1-201ENST00000363120 99 ntBASIC2.95□□□□□ -1.94
CHMP4BP1P59074 Y_RNA.432-201ENST00000384087 111 ntBASIC2.95□□□□□ -1.94
CHMP4BP1P59074 RNU6-160P-201ENST00000384591 107 ntBASIC2.95□□□□□ -1.94
CHMP4BP1P59074 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP4BP1P59074 AC008267.6-201ENST00000441664 139 ntBASIC2.95□□□□□ -1.94
CHMP4BP1P59074 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
CHMP4BP1P59074 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4BP1P59074 RNU6-508P-201ENST00000363231 103 ntBASIC2.94□□□□□ -1.94
CHMP4BP1P59074 RNU1-52P-201ENST00000384190 164 ntBASIC2.94□□□□□ -1.94
CHMP4BP1P59074 MIR29C-201ENST00000385231 88 ntBASIC2.94□□□□□ -1.94
CHMP4BP1P59074 SNORA75.5-201ENST00000391291 81 ntBASIC2.94□□□□□ -1.94
CHMP4BP1P59074 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP4BP1P59074 Y_RNA.686-201ENST00000516548 134 ntBASIC2.94□□□□□ -1.94
CHMP4BP1P59074 RNU2-56P-201ENST00000516826 190 ntBASIC2.94□□□□□ -1.94
CHMP4BP1P59074 SNORD53-201ENST00000579969 78 ntBASIC2.94□□□□□ -1.94
CHMP4BP1P59074 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP4BP1P59074 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4BP1P59074 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4BP1P59074 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP4BP1P59074 Y_RNA.634-201ENST00000364811 113 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 RNU6-915P-201ENST00000364943 103 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 SNORD20-201ENST00000384550 80 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 MIR1253-201ENST00000408273 105 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 RNU7-107P-201ENST00000459121 61 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 RNU6-1291P-201ENST00000516591 104 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 RNU2-60P-201ENST00000517290 128 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 AC097639.2-201ENST00000603159 172 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 SNORD14A-201ENST00000606526 91 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 AP001340.1-201ENST00000624405 217 ntBASIC2.93□□□□□ -1.94
CHMP4BP1P59074 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.93□□□□□ -1.94
CHMP4BP1P59074 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 SNORD115-3-201ENST00000363100 82 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 RNA5SP493-201ENST00000364115 91 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 Y_RNA.486-201ENST00000384398 107 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 AC007064.1-201ENST00000412238 351 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 RNU6-1299P-201ENST00000516316 100 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 RNU7-149P-201ENST00000516739 59 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 AL160236.1-201ENST00000556317 195 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 AL590808.1-201ENST00000618696 141 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 AC010297.1-201ENST00000623948 149 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 AC022513.1-201ENST00000624512 117 ntBASIC2.92□□□□□ -1.94
CHMP4BP1P59074 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP4BP1P59074 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP4BP1P59074 RNA5SP289-201ENST00000362332 137 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 U8.1-201ENST00000362843 134 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 Y_RNA.81-201ENST00000362997 102 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 U8.2-201ENST00000363156 134 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CHMP4BP1P59074 RNU2-55P-201ENST00000411146 174 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 AC010154.1-201ENST00000425857 269 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 YWHAEP4-201ENST00000505390 198 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 RNU6-659P-201ENST00000516454 104 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 AP001328.1-201ENST00000528550 176 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 AC064859.1-201ENST00000624741 174 ntBASIC2.91□□□□□ -1.94
CHMP4BP1P59074 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CHMP4BP1P59074 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CHMP4BP1P59074 Y_RNA.66-201ENST00000362862 102 ntBASIC2.9□□□□□ -1.95
CHMP4BP1P59074 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP4BP1P59074 AL353689.1-201ENST00000438895 199 ntBASIC2.9□□□□□ -1.95
CHMP4BP1P59074 RNU7-99P-201ENST00000516271 62 ntBASIC2.9□□□□□ -1.95
CHMP4BP1P59074 MIR3169-201ENST00000578032 83 ntBASIC2.9□□□□□ -1.95
CHMP4BP1P59074 AC011603.4-201ENST00000611325 277 ntBASIC2.9□□□□□ -1.95
CHMP4BP1P59074 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP4BP1P59074 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP4BP1P59074 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP4BP1P59074 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.9□□□□□ -1.95
CHMP4BP1P59074 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CHMP4BP1P59074 MIR6073-201ENST00000352083 89 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 Y_RNA.253-201ENST00000364562 112 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 SNORD50B-201ENST00000364995 70 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 RNU6-215P-201ENST00000365169 102 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 RNU6-80P-201ENST00000384195 107 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 SNORA70B-201ENST00000384210 135 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 SNORD72-201ENST00000390994 80 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 HMGN2P39-201ENST00000398005 273 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 AC099677.2-201ENST00000436385 175 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 RNA5SP320-201ENST00000516263 124 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 RNA5SP24-201ENST00000516478 95 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 AC007751.1-201ENST00000529260 376 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 AL353149.1-201ENST00000610667 244 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.89□□□□□ -1.95
CHMP4BP1P59074 TUG1_4.1-201ENST00000619464 181 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms