Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MIR8063-201ENST00000621930 81 ntBASIC1.26□□□□□ -2.21
PEX3P56589 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.26□□□□□ -2.21
PEX3P56589 Y_RNA.11-201ENST00000362375 109 ntBASIC1.25□□□□□ -2.21
PEX3P56589 RNU6-324P-201ENST00000363957 106 ntBASIC1.25□□□□□ -2.21
PEX3P56589 RNU4-41P-201ENST00000364426 143 ntBASIC1.25□□□□□ -2.21
PEX3P56589 Y_RNA.276-201ENST00000364732 109 ntBASIC1.25□□□□□ -2.21
PEX3P56589 RNU6-1227P-201ENST00000383981 107 ntBASIC1.25□□□□□ -2.21
PEX3P56589 Y_RNA.424-201ENST00000384063 103 ntBASIC1.25□□□□□ -2.21
PEX3P56589 RNU6-102P-201ENST00000384485 104 ntBASIC1.25□□□□□ -2.21
PEX3P56589 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.25□□□□□ -2.21
PEX3P56589 CALM2P4-201ENST00000430810 426 ntBASIC1.25□□□□□ -2.21
PEX3P56589 Z98949.2-201ENST00000440996 144 ntBASIC1.25□□□□□ -2.21
PEX3P56589 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.25□□□□□ -2.21
PEX3P56589 HSPE1P25-201ENST00000455484 251 ntBASIC1.25□□□□□ -2.21
PEX3P56589 HMGN1P10-201ENST00000474557 553 ntBASIC1.25□□□□□ -2.21
PEX3P56589 RNU6-897P-201ENST00000517135 105 ntBASIC1.25□□□□□ -2.21
PEX3P56589 Y_RNA.721-201ENST00000517207 102 ntBASIC1.25□□□□□ -2.21
PEX3P56589 AC113195.1-201ENST00000579952 141 ntBASIC1.25□□□□□ -2.21
PEX3P56589 Y_RNA.380-201ENST00000365663 111 ntBASIC1.24□□□□□ -2.21
PEX3P56589 AC117470.1-201ENST00000381974 330 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNU6-136P-201ENST00000384663 107 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNA5SP482-201ENST00000391269 118 ntBASIC1.24□□□□□ -2.21
PEX3P56589 U8.16-201ENST00000391279 133 ntBASIC1.24□□□□□ -2.21
PEX3P56589 AL590004.1-201ENST00000405321 300 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNU6-710P-201ENST00000410424 105 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
PEX3P56589 AC079140.2-201ENST00000506193 142 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNU6-496P-201ENST00000516145 99 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNU6-397P-201ENST00000516226 104 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNA5SP168-201ENST00000516642 112 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNU6-1153P-201ENST00000516760 105 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNU2-56P-201ENST00000516826 190 ntBASIC1.24□□□□□ -2.21
PEX3P56589 RNU7-110P-201ENST00000516891 62 ntBASIC1.24□□□□□ -2.21
PEX3P56589 AC044792.1-201ENST00000593294 196 ntBASIC1.24□□□□□ -2.21
PEX3P56589 AL365434.2-201ENST00000607979 234 ntBASIC1.24□□□□□ -2.21
PEX3P56589 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
PEX3P56589 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
PEX3P56589 SNORD33-201ENST00000362761 85 ntBASIC1.23□□□□□ -2.21
PEX3P56589 RNY1P10-201ENST00000363268 113 ntBASIC1.23□□□□□ -2.21
PEX3P56589 Y_RNA.153-201ENST00000363615 91 ntBASIC1.23□□□□□ -2.21
PEX3P56589 U8.5-201ENST00000364528 136 ntBASIC1.23□□□□□ -2.21
PEX3P56589 SNORA33.2-201ENST00000365413 134 ntBASIC1.23□□□□□ -2.21
PEX3P56589 Y_RNA.418-201ENST00000384029 102 ntBASIC1.23□□□□□ -2.21
PEX3P56589 Y_RNA.455-201ENST00000384230 98 ntBASIC1.23□□□□□ -2.21
PEX3P56589 Y_RNA.456-201ENST00000384232 111 ntBASIC1.23□□□□□ -2.21
PEX3P56589 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
PEX3P56589 RPL39P38-201ENST00000467018 153 ntBASIC1.23□□□□□ -2.21
PEX3P56589 HMGN1P7-201ENST00000491722 313 ntBASIC1.23□□□□□ -2.21
PEX3P56589 MIR3145-201ENST00000580727 82 ntBASIC1.23□□□□□ -2.21
PEX3P56589 MIR4781-201ENST00000585250 76 ntBASIC1.23□□□□□ -2.21
PEX3P56589 MIR4762-201ENST00000585261 75 ntBASIC1.23□□□□□ -2.21
PEX3P56589 AL356055.1-201ENST00000602528 446 ntBASIC1.23□□□□□ -2.21
PEX3P56589 AL355297.3-201ENST00000604082 446 ntBASIC1.23□□□□□ -2.21
PEX3P56589 AC005972.2-201ENST00000604690 348 ntBASIC1.23□□□□□ -2.21
PEX3P56589 SNORD113-5-201ENST00000607261 78 ntBASIC1.23□□□□□ -2.21
PEX3P56589 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.23□□□□□ -2.21
PEX3P56589 MIR376A1-201ENST00000616574 68 ntBASIC1.23□□□□□ -2.21
PEX3P56589 Y_RNA.136-201ENST00000363444 102 ntBASIC1.22□□□□□ -2.21
PEX3P56589 Y_RNA.265-201ENST00000364677 108 ntBASIC1.22□□□□□ -2.21
PEX3P56589 Y_RNA.389-201ENST00000383924 113 ntBASIC1.22□□□□□ -2.21
PEX3P56589 RNU6-1323P-201ENST00000384025 107 ntBASIC1.22□□□□□ -2.21
PEX3P56589 Y_RNA.527-201ENST00000384573 102 ntBASIC1.22□□□□□ -2.21
PEX3P56589 Y_RNA.581-201ENST00000391017 97 ntBASIC1.22□□□□□ -2.21
PEX3P56589 RNU6-101P-201ENST00000410323 104 ntBASIC1.22□□□□□ -2.21
PEX3P56589 ELOCP20-201ENST00000422460 345 ntBASIC1.22□□□□□ -2.21
PEX3P56589 AC092991.1-201ENST00000477176 376 ntBASIC1.22□□□□□ -2.21
PEX3P56589 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
PEX3P56589 SUMO2P16-201ENST00000519475 264 ntBASIC1.22□□□□□ -2.21
PEX3P56589 AC011604.1-201ENST00000545978 196 ntBASIC1.22□□□□□ -2.21
PEX3P56589 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.22□□□□□ -2.21
PEX3P56589 AP001485.1-201ENST00000604799 199 ntBASIC1.22□□□□□ -2.21
PEX3P56589 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.22□□□□□ -2.21
PEX3P56589 Y_RNA.4-201ENST00000362333 112 ntBASIC1.21□□□□□ -2.22
PEX3P56589 SNORD113-8-201ENST00000363497 74 ntBASIC1.21□□□□□ -2.22
PEX3P56589 Y_RNA.214-201ENST00000364201 112 ntBASIC1.21□□□□□ -2.22
PEX3P56589 Y_RNA.383-201ENST00000383855 97 ntBASIC1.21□□□□□ -2.22
PEX3P56589 RNU6-1080P-201ENST00000383982 107 ntBASIC1.21□□□□□ -2.22
PEX3P56589 SNORA72-201ENST00000384339 132 ntBASIC1.21□□□□□ -2.22
PEX3P56589 RNU6-21P-201ENST00000384710 107 ntBASIC1.21□□□□□ -2.22
PEX3P56589 MIR653-201ENST00000385279 96 ntBASIC1.21□□□□□ -2.22
PEX3P56589 RNU6-855P-201ENST00000410395 104 ntBASIC1.21□□□□□ -2.22
PEX3P56589 SEPT14P8-201ENST00000508026 178 ntBASIC1.21□□□□□ -2.22
PEX3P56589 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
PEX3P56589 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
PEX3P56589 AL591926.4-201ENST00000616895 298 ntBASIC1.21□□□□□ -2.22
PEX3P56589 SNORD3E-202ENST00000627253 216 ntBASIC1.21□□□□□ -2.22
PEX3P56589 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PEX3P56589 Y_RNA.26-201ENST00000362539 101 ntBASIC1.2□□□□□ -2.22
PEX3P56589 snoU2_19.2-201ENST00000363024 80 ntBASIC1.2□□□□□ -2.22
PEX3P56589 RNU4-80P-201ENST00000363200 141 ntBASIC1.2□□□□□ -2.22
PEX3P56589 Y_RNA.164-201ENST00000363709 102 ntBASIC1.2□□□□□ -2.22
PEX3P56589 Y_RNA.202-201ENST00000364083 110 ntBASIC1.2□□□□□ -2.22
PEX3P56589 Y_RNA.253-201ENST00000364562 112 ntBASIC1.2□□□□□ -2.22
PEX3P56589 Y_RNA.341-201ENST00000365341 102 ntBASIC1.2□□□□□ -2.22
PEX3P56589 RNA5SP259-201ENST00000365541 109 ntBASIC1.2□□□□□ -2.22
PEX3P56589 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AC005534.2-201ENST00000431047 433 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AC104332.1-201ENST00000440471 797 ntBASIC1.2□□□□□ -2.22
PEX3P56589 AC233266.1-201ENST00000454518 96 ntBASIC1.2□□□□□ -2.22
PEX3P56589 LINC01399-202ENST00000458450 244 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms