Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNA5SP482-201ENST00000391269 118 ntBASIC1.98□□□□□ -2.09
TM4SF4P48230 RNU6-121P-201ENST00000410525 99 ntBASIC1.98□□□□□ -2.09
TM4SF4P48230 RPL21P38-201ENST00000418090 167 ntBASIC1.98□□□□□ -2.09
TM4SF4P48230 HMGN1P7-201ENST00000491722 313 ntBASIC1.98□□□□□ -2.09
TM4SF4P48230 AC008834.1-201ENST00000511612 175 ntBASIC1.98□□□□□ -2.09
TM4SF4P48230 RNU6-327P-201ENST00000516270 127 ntBASIC1.98□□□□□ -2.09
TM4SF4P48230 CBX3P4-201ENST00000538909 354 ntBASIC1.98□□□□□ -2.09
TM4SF4P48230 AL645939.4-201ENST00000604495 135 ntBASIC1.98□□□□□ -2.09
TM4SF4P48230 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.98□□□□□ -2.09
TM4SF4P48230 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
TM4SF4P48230 RNU6-238P-201ENST00000363313 106 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 Y_RNA.136-201ENST00000363444 102 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 RNU6-60P-201ENST00000364792 103 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 RNU6-1105P-201ENST00000384774 107 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 RNU6-1109P-201ENST00000391187 107 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 RPS4XP11-201ENST00000446897 772 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 MTATP8P1-201ENST00000467115 207 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
TM4SF4P48230 AC011604.1-201ENST00000545978 196 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 AC008269.2-201ENST00000561915 1105 ntBASIC1.97□□□□□ -2.09
TM4SF4P48230 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TM4SF4P48230 SNORA1B-201ENST00000362535 133 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 Y_RNA.149-201ENST00000363558 117 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 RNU1-42P-201ENST00000364033 160 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 RNU6-806P-201ENST00000365147 105 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 RNU6-326P-201ENST00000365480 107 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 SNORA72-201ENST00000384339 132 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.96□□□□□ -2.1
TM4SF4P48230 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.96□□□□□ -2.1
TM4SF4P48230 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.96□□□□□ -2.1
TM4SF4P48230 RNU1-123P-201ENST00000458950 160 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 RMST_2.1-201ENST00000617263 136 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 AC073349.3-201ENST00000617616 186 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 MIR8063-201ENST00000621930 81 ntBASIC1.96□□□□□ -2.1
TM4SF4P48230 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
TM4SF4P48230 ZNF720P1-201ENST00000562403 1939 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 RNU6-1123P-201ENST00000362347 106 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 SNORA7.1-201ENST00000363750 139 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 MIR1302-3-201ENST00000408128 138 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 MIR1302-6-201ENST00000408466 90 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 HSPE1P24-201ENST00000450782 238 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 AC098869.1-201ENST00000481627 292 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 RNU6-1045P-201ENST00000516321 107 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 SNORA31.10-201ENST00000516482 106 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 RNU6-570P-201ENST00000517051 105 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 Y_RNA.714-201ENST00000517065 90 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 SNORD53B-201ENST00000577887 78 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 POLR3GP1-201ENST00000594073 261 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.95□□□□□ -2.1
TM4SF4P48230 AC136443.5-201ENST00000603741 370 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 AL513423.1-201ENST00000621695 132 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.95□□□□□ -2.1
TM4SF4P48230 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TM4SF4P48230 ICE2P2-201ENST00000483823 2787 ntBASIC1.95□□□□□ -2.1
TM4SF4P48230 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TM4SF4P48230 MIR424-201ENST00000362227 98 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 snoU2_19.2-201ENST00000363024 80 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 Y_RNA.310-201ENST00000365063 113 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.94□□□□□ -2.1
TM4SF4P48230 RPL30P13-201ENST00000418873 348 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 PGBD4P5-201ENST00000445958 426 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 TRBVB-201ENST00000477100 408 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 RNA5SP102-201ENST00000516865 106 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 AL117187.1-201ENST00000555482 181 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 AC021506.2-201ENST00000612354 169 ntBASIC1.94□□□□□ -2.1
TM4SF4P48230 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TM4SF4P48230 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TM4SF4P48230 SNORD33-201ENST00000362761 85 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 Y_RNA.84-201ENST00000363011 104 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 RNU6-1323P-201ENST00000384025 107 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 Y_RNA.418-201ENST00000384029 102 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 Y_RNA.541-201ENST00000384640 113 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 Y_RNA.574-201ENST00000384766 95 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 MIR215-201ENST00000384858 110 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 MTND2P23-201ENST00000422990 651 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 MTCO1P5-201ENST00000433573 344 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 RPL23AP54-201ENST00000495129 419 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 RNU6-191P-201ENST00000516295 94 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 RNA5SP220-201ENST00000516298 104 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 SCARNA15.1-201ENST00000516384 125 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 AC136628.3-201ENST00000521868 290 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.93□□□□□ -2.1
TM4SF4P48230 AL353621.2-201ENST00000605340 133 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 MIR548AY-201ENST00000617669 107 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
TM4SF4P48230 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
TM4SF4P48230 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TM4SF4P48230 Y_RNA.26-201ENST00000362539 101 ntBASIC1.92□□□□□ -2.1
TM4SF4P48230 Y_RNA.172-201ENST00000363765 102 ntBASIC1.92□□□□□ -2.1
TM4SF4P48230 RNU6-1080P-201ENST00000383982 107 ntBASIC1.92□□□□□ -2.1
TM4SF4P48230 MIR934-201ENST00000401241 83 ntBASIC1.92□□□□□ -2.1
TM4SF4P48230 RNA5SP480-201ENST00000516840 109 ntBASIC1.92□□□□□ -2.1
TM4SF4P48230 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.92□□□□□ -2.1
TM4SF4P48230 SNORD3E-202ENST00000627253 216 ntBASIC1.92□□□□□ -2.1
TM4SF4P48230 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TM4SF4P48230 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms